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    agfg1.L ArfGAP with FG repeats 1 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 108717126, updated on 9-Dec-2024

    Summary

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    Official Symbol
    agfg1.L
    Official Full Name
    ArfGAP with FG repeats 1 L homeolog
    Primary source
    Xenbase:XB-GENE-17336991
    Locus tag
    XELAEV_18027908mg
    See related
    EnsemblRapid:ENSXLAG00005015404 AllianceGenome:Xenbase:XB-GENE-17336991
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    hrb
    Summary
    Predicted to enable GTPase activator activity. Predicted to act upstream of or within acrosome assembly; intermediate filament organization; and spermatid nucleus differentiation. Predicted to be located in cytoplasmic vesicle and membrane. Orthologous to human AGFG1 (ArfGAP with FG repeats 1). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See agfg1.L in Genome Data Viewer
    Location:
    chromosome: 5L
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (138629759..138701435, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (127557470..127629156, complement)

    Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene thiamine transporter 2 Neighboring gene thiamine transporter 2-like Neighboring gene thiamine transporter 2 Neighboring gene mitochondrial fission factor L homeolog Neighboring gene phosphotyrosine interaction domain containing 1 L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    arf-GAP domain and FG repeat-containing protein 1
    Names
    HIV-1 Rev binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      138629759..138701435 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018263936.2 → XP_018119425.1  arf-GAP domain and FG repeat-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8J0VCR6, A0A974HI25
      Related
      ENSXLAP00005045188.1, ENSXLAT00005046286.1

    2. XM_018263939.2 → XP_018119428.1  arf-GAP domain and FG repeat-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8J0VDJ3
      Related
      ENSXLAP00005045194.1, ENSXLAT00005046293.1

    3. XM_018263937.2 → XP_018119426.1  arf-GAP domain and FG repeat-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A1L8GBF8, A0A974HI25, A0A974HKG6
      Related
      ENSXLAP00005045191.1, ENSXLAT00005046290.1
    Nucleotide Protein Strain
    Heading Accession and Version

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