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    LOC121321372 regulatory factor X-associated protein [ Polyodon spathula (Mississippi paddlefish) ]

    Gene ID: 121321372, updated on 22-Mar-2024

    Summary

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    Gene symbol
    LOC121321372
    Gene description
    regulatory factor X-associated protein
    See related
    EnsemblRapid:ENSPAHG00005004288
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Polyodon spathula
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Polyodontidae; Polyodon
    Orthologs
    human zebrafish all
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    Genomic context

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    See LOC121321372 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current ASM1765450v1 (GCF_017654505.1) 9 NC_054542.1 (1490542..1494826, complement)

    Chromosome 9 - NC_054542.1Genomic Context describing neighboring genes Neighboring gene periostin-like Neighboring gene uncharacterized LOC121320414 Neighboring gene THAP domain-containing protein 5-like Neighboring gene serine-rich and transmembrane domain-containing protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_054542.1 Chromosome 9 Reference ASM1765450v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    regulatory factor X-associated protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Polyodon spathula Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1765450v1 Primary Assembly

    Genomic

    1. NC_054542.1 Reference ASM1765450v1 Primary Assembly

      Range
      1490542..1494826 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041260293.1 → XP_041116227.1  regulatory factor X-associated protein isoform X4

    2. XM_041260291.1 → XP_041116225.1  regulatory factor X-associated protein isoform X2

      Related
      ENSPAHP00005006216.1, ENSPAHT00005006566.1

    3. XM_041260289.1 → XP_041116223.1  regulatory factor X-associated protein isoform X1

    4. XM_041260292.1 → XP_041116226.1  regulatory factor X-associated protein isoform X3

    5. XM_041260288.1 → XP_041116222.1  regulatory factor X-associated protein isoform X1

    Nucleotide Protein
    Heading Accession and Version

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