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    LOC100786856 protein phosphatase 2C 32 [ Glycine max (soybean) ]

    Gene ID: 100786856, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100786856
    Gene description
    protein phosphatase 2C 32
    Locus tag
    GLYMA_19G222700v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100786856 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 19 NC_038255.2 (48028243..48035117)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 19 NC_038255.1 (47503555..47510467)

    Chromosome 19 - NC_038255.2Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C24B11.05 Neighboring gene peptidyl-prolyl cis-trans isomerase CYP14 Neighboring gene uncharacterized LOC121174144 Neighboring gene germin-like protein subfamily 2 member 2 Neighboring gene putative expansin-A17

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein serine/threonine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein phosphatase 2C 32

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038255.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      48028243..48035117
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003554537.5 → XP_003554585.1  protein phosphatase 2C 32

      UniProtKB/TrEMBL
      A0A0R0ERP4, K7MZP1
      Conserved Domains (2) summary
      smart00332
      Location:274 → 371
      PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain
      cd00143
      Location:584 → 878
      PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

    2. XM_041012707.1 → XP_040868641.1  protein phosphatase 2C 32

      UniProtKB/TrEMBL
      A0A0R0ERP4, K7MZP1
      Conserved Domains (2) summary
      smart00332
      Location:274 → 371
      PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain
      cd00143
      Location:584 → 878
      PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...

    RNA

    1. XR_001386589.3 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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