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    LOC100779408 pyruvate dehydrogenase (acetyl-transferring) kinase, mitochondrial [ Glycine max (soybean) ]

    Gene ID: 100779408, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100779408
    Gene description
    pyruvate dehydrogenase (acetyl-transferring) kinase, mitochondrial
    Locus tag
    GLYMA_13G119800v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100779408 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 13 NC_038249.2 (22264456..22268590, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 13 NC_038249.1 (23237389..23241052, complement)

    Chromosome 13 - NC_038249.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102670350 Neighboring gene pentatricopeptide repeat-containing protein At5g66520 Neighboring gene U1 spliceosomal RNA Neighboring gene uncharacterized LOC121173298 Neighboring gene SNARE superfamily protein Neighboring gene probable sugar phosphate/phosphate translocator At1g48230

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables pyruvate dehydrogenase (acetyl-transferring) kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of glucose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pyruvate dehydrogenase (acetyl-transferring) kinase, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038249.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      22264456..22268590 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003542361.5 → XP_003542409.1  pyruvate dehydrogenase (acetyl-transferring) kinase, mitochondrial

      UniProtKB/TrEMBL
      A0MP01
      Conserved Domains (2) summary
      cd16929
      Location:191 → 362
      HATPase_PDK-like; Histidine kinase-like ATPase domain of pyruvate dehydrogenase kinase, branched-chain alpha-ketoacid dehydrogenase kinase and related domains
      pfam10436
      Location:29 → 187
      BCDHK_Adom3; Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
    Nucleotide Protein
    Heading Accession and Version

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