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    LOC100794574 putative elongation factor TypA-like SVR3, chloroplastic [ Glycine max (soybean) ]

    Gene ID: 100794574, updated on 1-Feb-2025

    Summary

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    Gene symbol
    LOC100794574
    Gene description
    putative elongation factor TypA-like SVR3, chloroplastic
    Locus tag
    GLYMA_10G103000v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100794574 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 10 NC_038246.2 (21339898..21351062)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 10 NC_038246.1 (21584208..21595389)

    Chromosome 10 - NC_038246.2Genomic Context describing neighboring genes Neighboring gene arginine--tRNA ligase, cytoplasmic Neighboring gene uncharacterized LOC106794802 Neighboring gene small nucleolar RNA R71 Neighboring gene calcium-dependent protein kinase 20

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative elongation factor TypA-like SVR3, chloroplastic

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000004515.6-RS_2025_01

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038246.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      21339898..21351062
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003535856.5 → XP_003535904.1  putative elongation factor TypA-like SVR3, chloroplastic

      UniProtKB/TrEMBL
      I1LA71, I1LA72
      Conserved Domains (1) summary
      TIGR01394
      Location:87 → 680
      TypA_BipA; GTP-binding protein TypA/BipA
    Nucleotide Protein
    Heading Accession and Version

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