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    LOC100794276 UDP-rhamnose/UDP-galactose transporter 6 [ Glycine max (soybean) ]

    Gene ID: 100794276, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100794276
    Gene description
    UDP-rhamnose/UDP-galactose transporter 6
    Locus tag
    GLYMA_04G218200v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100794276 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 4 NC_016091.4 (47718384..47732784)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 4 NC_016091.3 (48898360..48912731)

    Chromosome 4 - NC_016091.4Genomic Context describing neighboring genes Neighboring gene probable serine/threonine-protein kinase At1g54610 Neighboring gene uncharacterized LOC102670238 Neighboring gene brassinosteroid receptor Neighboring gene WRKY transcription factor 45

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-galactose transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    UDP-rhamnose/UDP-galactose transporter 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_016091.4 Reference Glycine_max_v4.0 Primary Assembly

      Range
      47718384..47732784
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003523203.5 → XP_003523251.1  UDP-rhamnose/UDP-galactose transporter 6 isoform X1

      See identical proteins and their annotated locations for XP_003523251.1

      UniProtKB/TrEMBL
      K7KLK6
      Conserved Domains (1) summary
      cl26744
      Location:18 → 298
      TPT; Triose-phosphate Transporter family

    2. XM_026128289.2 → XP_025984074.1  UDP-rhamnose/UDP-galactose transporter 6 isoform X2

      Conserved Domains (1) summary
      cl26744
      Location:18 → 211
      TPT; Triose-phosphate Transporter family

    3. XM_006578753.4 → XP_006578816.1  UDP-rhamnose/UDP-galactose transporter 6 isoform X1

      See identical proteins and their annotated locations for XP_006578816.1

      UniProtKB/TrEMBL
      K7KLK6
      Conserved Domains (1) summary
      cl26744
      Location:18 → 298
      TPT; Triose-phosphate Transporter family

    4. XM_006578752.4 → XP_006578815.1  UDP-rhamnose/UDP-galactose transporter 6 isoform X1

      See identical proteins and their annotated locations for XP_006578815.1

      UniProtKB/TrEMBL
      K7KLK6
      Conserved Domains (1) summary
      cl26744
      Location:18 → 298
      TPT; Triose-phosphate Transporter family

    5. XM_041014989.1 → XP_040870923.1  UDP-rhamnose/UDP-galactose transporter 6 isoform X1

      UniProtKB/TrEMBL
      K7KLK6
      Conserved Domains (1) summary
      cl26744
      Location:18 → 298
      TPT; Triose-phosphate Transporter family
    Nucleotide Protein
    Heading Accession and Version

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