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    LOC100792501 subtilisin-like protease SBT1.6 [ Glycine max (soybean) ]

    Gene ID: 100792501, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100792501
    Gene description
    subtilisin-like protease SBT1.6
    Locus tag
    GLYMA_04G004200v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100792501 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 4 NC_016091.4 (361690..364664, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 4 NC_016091.3 (361750..364777, complement)

    Chromosome 4 - NC_016091.4Genomic Context describing neighboring genes Neighboring gene synaptotagmin-1 Neighboring gene transcription factor MYB047 Neighboring gene actin-depolymerizing factor 5 Neighboring gene peptidyl-prolyl cis-trans isomerase CYP39

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    subtilisin-like protease SBT1.6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_016091.4 Reference Glycine_max_v4.0 Primary Assembly

      Range
      361690..364664 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003523448.5 → XP_003523496.1  subtilisin-like protease SBT1.6 isoform X1

      UniProtKB/TrEMBL
      I1JSE5
      Conserved Domains (4) summary
      cd04852
      Location:113 → 587
      Peptidases_S8_3; Peptidase S8 family domain, uncharacterized subfamily 3
      cd02120
      Location:357 → 482
      PA_subtilisin_like; Protease-associated domain containing subtilisin-like proteases. This group contains various PA domain-containing subtilisin-like proteases including melon cucumisin, Arabidopsis thaliana Ara12, a nodule specific serine protease from Alnus glutinosa ag12, ...
      pfam05922
      Location:49 → 115
      Inhibitor_I9; Peptidase inhibitor I9
      pfam17766
      Location:667 → 771
      fn3_6; Fibronectin type-III domain

    2. XM_041014720.1 → XP_040870654.1  subtilisin-like protease SBT1.6 isoform X2

      Conserved Domains (2) summary
      cd04852
      Location:113 → 576
      Peptidases_S8_3; Peptidase S8 family domain, uncharacterized subfamily 3
      cd02120
      Location:357 → 471
      PA_subtilisin_like; Protease-associated domain containing subtilisin-like proteases. This group contains various PA domain-containing subtilisin-like proteases including melon cucumisin, Arabidopsis thaliana Ara12, a nodule specific serine protease from Alnus glutinosa ag12, ...
    Nucleotide Protein
    Heading Accession and Version

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