U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    LOC11427547 probable vacuolar amino acid transporter YPQ2 [ Medicago truncatula (barrel medic) ]

    Gene ID: 11427547, updated on 18-Aug-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC11427547
    Gene description
    probable vacuolar amino acid transporter YPQ2
    Locus tag
    MtrunA17_Chr7g0255081
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Medicago truncatula
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC11427547 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    102 current MtrunA17r5.0-ANR (GCF_003473485.1) 7 NC_053048.1 (41124583..41130474, complement)
    101 previous assembly MedtrA17_4.0 (GCF_000219495.3) 7 NC_016413.2 (34336673..34342874, complement)

    Chromosome 7 - NC_053048.1Genomic Context describing neighboring genes Neighboring gene protein PHYTOCHROME KINASE SUBSTRATE 4 Neighboring gene uncharacterized LOC11433218 Neighboring gene putative FBD-associated F-box protein At5g56440 Neighboring gene uncharacterized LOC11427791

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    LOW QUALITY PROTEIN: probable vacuolar amino acid transporter YPQ2
    Names
    PQ-loop protein/transmembrane family protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Medicago truncatula Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MtrunA17r5.0-ANR Primary Assembly

    Genomic

    1. NC_053048.1 Reference MtrunA17r5.0-ANR Primary Assembly

      Range
      41124583..41130474 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039828296.1 → XP_039684230.1  LOW QUALITY PROTEIN: probable vacuolar amino acid transporter YPQ2

      UniProtKB/TrEMBL
      A0A396H2Q5
      Conserved Domains (1) summary
      smart00679
      Location:23 → 54
      CTNS; Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases