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    SIT4 phosphatase-associated family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817384, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SIT4 phosphatase-associated family protein
    Primary source
    TAIR:AT2G28360
    Locus tag
    AT2G28360
    See related
    Araport:AT2G28360
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T1B3.12; T1B3_12
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    19
    Sequence:
    Chromosome: 2; NC_003071.7 (12124152..12130092, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene auxin response factor 10 Neighboring gene low-molecular-weight cysteine-rich 5 Neighboring gene Uncharacterized protein family (UPF0497) Neighboring gene dsRNA-binding protein 2 Neighboring gene SAND family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
    2. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_128396.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein phosphatase binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SIT4 phosphatase-associated family protein
    NP_180403.4
    • SIT4 phosphatase-associated family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT1G07990.1); Has 1543 Blast hits to 1191 proteins in 250 species: Archae - 2; Bacteria - 177; Metazoa - 564; Fungi - 334; Plants - 115; Viruses - 14; Other Eukaryotes - 337 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      12124152..12130092 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128396.5 → NP_180403.4  SIT4 phosphatase-associated family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180403.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X1Z7, F4IIN7
      Conserved Domains (2) summary
      pfam04499
      Location:129 → 490
      SAPS; SIT4 phosphatase-associated protein
      NF033845
      Location:503 → 668
      MSCRAMM_ClfB; MSCRAMM family adhesin clumping factor ClfB
    Nucleotide Protein
    Heading Accession and Version

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