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    taap-1 TAil-Anchored Protein [ Caenorhabditis elegans ]

    Gene ID: 187453, updated on 9-Dec-2024

    Summary

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    Official Symbol
    taap-1
    Official Full Name
    TAil-Anchored Protein
    Primary source
    WormBase:WBGene00010879
    Locus tag
    CELE_M05D6.6
    See related
    AllianceGenome:WB:WBGene00010879
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Orthologous to human FAM162A (family with sequence similarity 162 member A) and FAM162B (family with sequence similarity 162 member B). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See taap-1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_003280.10 (8482376..8483269, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Tyrosine-protein phosphatase domain-containing protein Neighboring gene Beta-lactamase-related domain-containing protein Neighboring gene HIG1 domain-containing protein Neighboring gene Trimethyllysine dioxygenase, mitochondrial Neighboring gene Receptor-type tyrosine-protein phosphatase kappa;Receptor-type tyrosine-protein phosphatase mu;Tyrosine-protein phosphatase domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Individual cell types in C. elegans age differently and activate distinct cell-protective responses. Roux AE, et al. Cell Rep, 2023 Aug 29. PMID 37531250
    2. CCAR-1 works together with the U2AF large subunit UAF-1 to regulate alternative splicing. Lugano DI, et al. RNA Biol, 2024 Jan. PMID 38126797, Free PMC Article
    3. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
    4. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    TAil-Anchored Protein
    NP_495792.1
    • Confirmed by transcript evidence;
      Product from WormBase gene class taap

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      8482376..8483269 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_063391.7 → NP_495792.1  TAil-Anchored Protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_495792.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q21525
    Nucleotide Protein
    Heading Accession and Version

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