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    CPNE5 copine 5 [ Hyaena hyaena (striped hyena) ]

    Gene ID: 120233849, updated on 21-Mar-2024

    Summary

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    Gene symbol
    CPNE5
    Gene description
    copine 5
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hyaena hyaena
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Hyaenidae; Hyaena
    Orthologs
    human mouse all
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    Genomic context

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    See CPNE5 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    100 current ASM300989v1 (GCF_003009895.1) Unplaced Scaffold NW_024080729.1 (2514771..2606813)

    NW_024080729.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C6orf89 homolog Neighboring gene peptidylprolyl isomerase like 1 Neighboring gene galanin receptor type 1-like Neighboring gene RAB44, member RAS oncogene family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024080729 Unplaced Scaffold Reference ASM300989v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium-dependent phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to calcium ion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    copine-5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Hyaena hyaena Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM300989v1 Primary Assembly

    Genomic

    1. NW_024080729.1 Reference ASM300989v1 Primary Assembly

      Range
      2514771..2606813
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039235331.1 → XP_039091262.1  copine-5 isoform X1

      Conserved Domains (3) summary
      cd04047
      Location:194 → 305
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:23 → 137
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:315 → 571
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...

    2. XM_039235332.1 → XP_039091263.1  copine-5 isoform X2

      Conserved Domains (3) summary
      cd04047
      Location:177 → 288
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:23 → 137
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:298 → 554
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...

    3. XM_039235334.1 → XP_039091265.1  copine-5 isoform X3

      Conserved Domains (3) summary
      cd04047
      Location:139 → 250
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:2 → 99
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:260 → 516
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...

    4. XM_039235333.1 → XP_039091264.1  copine-5 isoform X3

      Conserved Domains (3) summary
      cd04047
      Location:139 → 250
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:2 → 99
      C2A_Copine; C2 domain first repeat in Copine
      cd01459
      Location:260 → 516
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...

    5. XM_039235336.1 → XP_039091267.1  copine-5 isoform X5

      Conserved Domains (1) summary
      cd01459
      Location:2 → 262
      vWA_copine_like; VWA Copine: Copines are phospholipid-binding proteins originally identified in paramecium. They are found in human and orthologues have been found in C. elegans and Arabidopsis Thaliana. None have been found in D. Melanogaster or S. Cereviciae. ...

    6. XM_039235335.1 → XP_039091266.1  copine-5 isoform X4

      Conserved Domains (1) summary
      pfam07002
      Location:1 → 213
      Copine
    Nucleotide Protein
    Heading Accession and Version

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