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    LOC103716739 glutathione S-transferase U17-like [ Phoenix dactylifera (date palm) ]

    Gene ID: 103716739, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC103716739
    Gene description
    glutathione S-transferase U17-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Phoenix dactylifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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    Genomic context

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    See LOC103716739 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103 current palm_55x_up_171113_PBpolish2nd_filt_p (GCF_009389715.1) Unplaced Scaffold NW_024068473.1 (83192..85195, complement)
    102 previous assembly DPV01 (GCF_000413155.1) Unplaced Scaffold NW_008246745.1 (15756..17757)

    NW_024068473.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120108024 Neighboring gene glutathione S-transferase U17-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glutathione transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glutathione metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glutathione S-transferase U17-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Phoenix dactylifera Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference palm_55x_up_171113_PBpolish2nd_filt_p Primary Assembly

    Genomic

    1. NW_024068473.1 Reference palm_55x_up_171113_PBpolish2nd_filt_p Primary Assembly

      Range
      83192..85195 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008804869.4 → XP_008803091.1  glutathione S-transferase U17-like

      UniProtKB/TrEMBL
      A0A8B7CNN2
      Conserved Domains (3) summary
      cd03185
      Location:167 → 295
      GST_C_Tau; C-terminal, alpha helical domain of Class Tau Glutathione S-transferases
      COG0625
      Location:83 → 281
      GstA; Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
      cd03058
      Location:82 → 155
      GST_N_Tau; GST_N family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, ...
    Nucleotide Protein
    Heading Accession and Version

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