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    LOC120063403 cytosolic arginine sensor for mTORC1 subunit 1-like [ Salvelinus namaycush (lake trout) ]

    Gene ID: 120063403, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC120063403
    Gene description
    cytosolic arginine sensor for mTORC1 subunit 1-like
    See related
    EnsemblRapid:ENSSNMG00000010947
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salvelinus namaycush
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
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    Genomic context

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    See LOC120063403 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current SaNama_1.0 (GCF_016432855.1) 18 NC_052324.1 (36580283..36600897, complement)

    Chromosome 18 - NC_052324.1Genomic Context describing neighboring genes Neighboring gene RING finger and transmembrane domain-containing protein 2-like Neighboring gene SREBP regulating gene protein Neighboring gene nipsnap homolog 1 (C. elegans) Neighboring gene nitric oxide synthase, brain-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052324.1 Chromosome 18 Reference SaNama_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables arginine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to L-arginine IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of TORC1 signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytosolic arginine sensor for mTORC1 subunit 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Salvelinus namaycush Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SaNama_1.0 Primary Assembly

    Genomic

    1. NC_052324.1 Reference SaNama_1.0 Primary Assembly

      Range
      36580283..36600897 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039013769.1 → XP_038869697.1  cytosolic arginine sensor for mTORC1 subunit 1-like

      UniProtKB/TrEMBL
      A0A8U1F4J9
      Related
      ENSSNMP00000014513.1, ENSSNMT00000016575.1
      Conserved Domains (2) summary
      pfam13840
      Location:260 → 324
      ACT_7; ACT domain
      pfam18700
      Location:9 → 69
      Castor1_N; Cytosolic arginine sensor for mTORC1 subunit 1 N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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