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    DCAF10 DDB1 and CUL4 associated factor 10 [ Motacilla alba alba ]

    Gene ID: 119696214, updated on 3-Aug-2024

    Summary

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    Gene symbol
    DCAF10
    Gene description
    DDB1 and CUL4 associated factor 10
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Motacilla alba alba (sub-species: alba)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Motacillidae; Motacilla
    Orthologs
    human mouse all
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    Genomic context

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    See DCAF10 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current Motacilla_alba_V1.0_pri (GCF_015832195.1) Z NC_052046.1 (75292619..75302136)

    Chromosome Z - NC_052046.1Genomic Context describing neighboring genes Neighboring gene FERM and PDZ domain containing 1 Neighboring gene tRNA methyltransferase 10B Neighboring gene zinc finger and BTB domain containing 5 Neighboring gene glyoxylate reductase/hydroxypyruvate reductase-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_052046.1 Chromosome Z Reference Motacilla_alba_V1.0_pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Cul4-RING E3 ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DDB1- and CUL4-associated factor 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Motacilla alba alba Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Motacilla_alba_V1.0_pri Primary Assembly

    Genomic

    1. NC_052046.1 Reference Motacilla_alba_V1.0_pri Primary Assembly

      Range
      75292619..75302136
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038125936.1 → XP_037981864.1  DDB1- and CUL4-associated factor 10 isoform X1

      UniProtKB/TrEMBL
      A0A7K5CI25
      Conserved Domains (3) summary
      smart00320
      Location:430 → 468
      WD40; WD40 repeats
      sd00039
      Location:85 → 120
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:77 → 232
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    2. XM_038125937.1 → XP_037981865.1  DDB1- and CUL4-associated factor 10 isoform X2

      UniProtKB/TrEMBL
      A0A7K5CI25
      Conserved Domains (3) summary
      smart00320
      Location:422 → 460
      WD40; WD40 repeats
      sd00039
      Location:85 → 120
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:77 → 232
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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