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    RNF123 ring finger protein 123 [ Molossus molossus (Pallas's mastiff bat) ]

    Gene ID: 118633157, updated on 30-Mar-2024

    Summary

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    Gene symbol
    RNF123
    Gene description
    ring finger protein 123
    Locus tag
    HJG59_015681
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Molossus molossus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Molossidae; Molossus
    Orthologs
    human mouse all
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    Genomic context

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    See RNF123 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    100 current mMolMol1.p (GCF_014108415.1) Unplaced Scaffold NW_023425353.1 (64269474..64298358)

    NW_023425353.1Genomic Context describing neighboring genes Neighboring gene acylaminoacyl-peptide hydrolase Neighboring gene macrophage stimulating 1 Neighboring gene adhesion molecule with Ig like domain 3 Neighboring gene GDP-mannose pyrophosphorylase B Neighboring gene inositol hexakisphosphate kinase 1 Neighboring gene aminoacyl tRNA synthase complex-interacting multifunctional protein 2-like Neighboring gene cadherin related family member 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_023425353 Unplaced Scaffold Reference mMolMol1.p

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin-protein transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis involved in protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase RNF123

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Molossus molossus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mMolMol1.p

    Genomic

    1. NW_023425353.1 Reference mMolMol1.p

      Range
      64269474..64298358
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036266771.1 → XP_036122664.1  E3 ubiquitin-protein ligase RNF123 isoform X1

      UniProtKB/TrEMBL
      A0A7J8DDI6
      Conserved Domains (2) summary
      cd12882
      Location:123 → 250
      SPRY_RNF123; SPRY domain at N-terminus of ring finger protein 123
      cd16541
      Location:1273 → 1313
      RING-HC_RNF123; RING finger, HC subclass, found in RING finger protein 123 (RNF123) and similar proteins

    2. XM_036266772.1 → XP_036122665.1  E3 ubiquitin-protein ligase RNF123 isoform X1

      UniProtKB/TrEMBL
      A0A7J8DDI6
      Conserved Domains (2) summary
      cd12882
      Location:123 → 250
      SPRY_RNF123; SPRY domain at N-terminus of ring finger protein 123
      cd16541
      Location:1273 → 1313
      RING-HC_RNF123; RING finger, HC subclass, found in RING finger protein 123 (RNF123) and similar proteins

    3. XM_036266773.1 → XP_036122666.1  E3 ubiquitin-protein ligase RNF123 isoform X2

      UniProtKB/TrEMBL
      A0A7J8DCZ4, A0A7J8DDI6
      Conserved Domains (2) summary
      cd12882
      Location:123 → 250
      SPRY_RNF123; SPRY domain at N-terminus of ring finger protein 123
      cd16541
      Location:1252 → 1292
      RING-HC_RNF123; RING finger, HC subclass, found in RING finger protein 123 (RNF123) and similar proteins

    4. XM_036266767.1 → XP_036122660.1  E3 ubiquitin-protein ligase RNF123 isoform X1

      UniProtKB/TrEMBL
      A0A7J8DDI6
      Conserved Domains (2) summary
      cd12882
      Location:123 → 250
      SPRY_RNF123; SPRY domain at N-terminus of ring finger protein 123
      cd16541
      Location:1273 → 1313
      RING-HC_RNF123; RING finger, HC subclass, found in RING finger protein 123 (RNF123) and similar proteins

    5. XM_036266775.1 → XP_036122668.1  E3 ubiquitin-protein ligase RNF123 isoform X3

      UniProtKB/TrEMBL
      A0A7J8DDI6
      Conserved Domains (2) summary
      cd16541
      Location:1170 → 1210
      RING-HC_RNF123; RING finger, HC subclass, found in RING finger protein 123 (RNF123) and similar proteins
      cl02614
      Location:123 → 190
      SPRY; SPRY domain

    6. XM_036266769.1 → XP_036122662.1  E3 ubiquitin-protein ligase RNF123 isoform X1

      UniProtKB/TrEMBL
      A0A7J8DDI6
      Conserved Domains (2) summary
      cd12882
      Location:123 → 250
      SPRY_RNF123; SPRY domain at N-terminus of ring finger protein 123
      cd16541
      Location:1273 → 1313
      RING-HC_RNF123; RING finger, HC subclass, found in RING finger protein 123 (RNF123) and similar proteins

    7. XM_036266774.1 → XP_036122667.1  E3 ubiquitin-protein ligase RNF123 isoform X2

      UniProtKB/TrEMBL
      A0A7J8DCZ4, A0A7J8DDI6
      Conserved Domains (2) summary
      cd12882
      Location:123 → 250
      SPRY_RNF123; SPRY domain at N-terminus of ring finger protein 123
      cd16541
      Location:1252 → 1292
      RING-HC_RNF123; RING finger, HC subclass, found in RING finger protein 123 (RNF123) and similar proteins

    8. XM_036266770.1 → XP_036122663.1  E3 ubiquitin-protein ligase RNF123 isoform X1

      UniProtKB/TrEMBL
      A0A7J8DDI6
      Conserved Domains (2) summary
      cd12882
      Location:123 → 250
      SPRY_RNF123; SPRY domain at N-terminus of ring finger protein 123
      cd16541
      Location:1273 → 1313
      RING-HC_RNF123; RING finger, HC subclass, found in RING finger protein 123 (RNF123) and similar proteins

    9. XM_036266776.1 → XP_036122669.1  E3 ubiquitin-protein ligase RNF123 isoform X4

      UniProtKB/TrEMBL
      A0A7J8DDB4
      Conserved Domains (1) summary
      cd16541
      Location:1002 → 1042
      RING-HC_RNF123; RING finger, HC subclass, found in RING finger protein 123 (RNF123) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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