U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    Morn1 MORN repeat containing 1 [ Mus musculus (house mouse) ]

    Gene ID: 76866, updated on 27-Nov-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Morn1provided by MGI
    Official Full Name
    MORN repeat containing 1provided by MGI
    Primary source
    MGI:MGI:1924116
    See related
    Ensembl:ENSMUSG00000029049 AllianceGenome:MGI:1924116
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2900057D20Rik; 4930417P05Rik
    Summary
    Orthologous to human MORN1 (MORN repeat containing 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in testis adult (RPKM 2.6), cerebellum adult (RPKM 1.1) and 26 other tissues See more
    Orthologs
    human all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Morn1 in Genome Data Viewer
    Location:
    4 E2; 4 86.17 cM
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (155167771..155229964)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (155083643..155145507)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene phospholipase C, eta 2 Neighboring gene STARR-positive B cell enhancer ABC_E10295 Neighboring gene STARR-positive B cell enhancer ABC_E1295 Neighboring gene peroxisomal biogenesis factor 10 Neighboring gene retention in endoplasmic reticulum sorting receptor 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:154500916-154501099 Neighboring gene CapStarr-seq enhancer MGSCv37_chr4:154524494-154524677 Neighboring gene STARR-positive B cell enhancer mm9_chr4:154536903-154537203 Neighboring gene STARR-seq mESC enhancer starr_12252 Neighboring gene ski sarcoma viral oncogene homolog (avian) Neighboring gene STARR-seq mESC enhancer starr_12254 Neighboring gene predicted gene, 42364

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, et al. Development, 2000 Apr. PMID 10725249
    2. Libraries enriched for alternatively spliced exons reveal splicing patterns in melanocytes and melanomas. Watahiki A, et al. Nat Methods, 2004 Dec. PMID 15782199
    3. Genetic determinants of micronucleus formation in vivo. Adams DJ, et al. Nature, 2024 Mar. PMID 38355793, Free PMC Article
    4. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750, Free PMC Article
    5. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Variation

    Go to the top of the page Help

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (2) 

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    MORN repeat-containing protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001081100.1 → NP_001074569.1  MORN repeat-containing protein 1 isoform 1

      See identical proteins and their annotated locations for NP_001074569.1

      Status: VALIDATED

      Source sequence(s)
      AL670413
      Consensus CDS
      CCDS38991.1
      UniProtKB/TrEMBL
      A2RTS7
      Related
      ENSMUSP00000030915.5, ENSMUST00000030915.11
      Conserved Domains (3) summary
      smart00698
      Location:131 → 151
      MORN; Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases
      COG4642
      Location:83 → 213
      COG4642; Uncharacterized conserved protein [Function unknown]
      pfam02493
      Location:155 → 177
      MORN; MORN repeat

    2. NM_001356327.1 → NP_001343256.1  MORN repeat-containing protein 1 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AK045316, AK148312, AL670413
      Related
      ENSMUST00000155375.8
      Conserved Domains (1) summary
      cl27415
      Location:1 → 108
      COG4642; Uncharacterized conserved protein [Function unknown]

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      155167771..155229964
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030253897.2 → XP_030109757.1  MORN repeat-containing protein 1 isoform X4

    2. XM_030253899.2 → XP_030109759.1  MORN repeat-containing protein 1 isoform X11

    3. XM_030253894.2 → XP_030109754.1  MORN repeat-containing protein 1 isoform X1

    4. XM_030253895.2 → XP_030109755.1  MORN repeat-containing protein 1 isoform X2

    5. XM_030253896.2 → XP_030109756.1  MORN repeat-containing protein 1 isoform X3

    6. XM_030253898.2 → XP_030109758.1  MORN repeat-containing protein 1 isoform X5

    7. XM_006539262.4 → XP_006539325.1  MORN repeat-containing protein 1 isoform X7

      Conserved Domains (1) summary
      PLN03185
      Location:5 → 192
      PLN03185; phosphatidylinositol phosphate kinase; Provisional

    8. XM_006539261.4 → XP_006539324.1  MORN repeat-containing protein 1 isoform X6

      Conserved Domains (1) summary
      COG4642
      Location:38 → 151
      COG4642; Uncharacterized conserved protein [Function unknown]

    9. XM_006539263.4 → XP_006539326.1  MORN repeat-containing protein 1 isoform X8

      Conserved Domains (1) summary
      PLN03185
      Location:5 → 171
      PLN03185; phosphatidylinositol phosphate kinase; Provisional

    10. XM_036164540.1 → XP_036020433.1  MORN repeat-containing protein 1 isoform X9

      Conserved Domains (1) summary
      PLN03185
      Location:5 → 192
      PLN03185; phosphatidylinositol phosphate kinase; Provisional

    11. XM_030253902.1 → XP_030109762.1  MORN repeat-containing protein 1 isoform X17

    12. XM_030253900.1 → XP_030109760.1  MORN repeat-containing protein 1 isoform X14

      Conserved Domains (1) summary
      PLN03185
      Location:1 → 108
      PLN03185; phosphatidylinositol phosphate kinase; Provisional

    13. XM_006539267.5 → XP_006539330.1  MORN repeat-containing protein 1 isoform X12

      Conserved Domains (1) summary
      PLN03185
      Location:1 → 108
      PLN03185; phosphatidylinositol phosphate kinase; Provisional

    14. XM_006539269.5 → XP_006539332.1  MORN repeat-containing protein 1 isoform X15

      See identical proteins and their annotated locations for XP_006539332.1

    15. XM_006539268.5 → XP_006539331.1  MORN repeat-containing protein 1 isoform X13

    16. XM_006539270.2 → XP_006539333.1  MORN repeat-containing protein 1 isoform X15

      See identical proteins and their annotated locations for XP_006539333.1

    17. XM_006539271.1 → XP_006539334.1  MORN repeat-containing protein 1 isoform X15

      See identical proteins and their annotated locations for XP_006539334.1

    18. XM_017320446.2 → XP_017175935.1  MORN repeat-containing protein 1 isoform X17

    19. XM_030253901.1 → XP_030109761.1  MORN repeat-containing protein 1 isoform X17

    20. XM_017320447.2 → XP_017175936.1  MORN repeat-containing protein 1 isoform X17

    21. XM_017320444.2 → XP_017175933.1  MORN repeat-containing protein 1 isoform X16

    22. XM_006539275.2 → XP_006539338.1  MORN repeat-containing protein 1 isoform X17

      See identical proteins and their annotated locations for XP_006539338.1

    23. XM_006539273.2 → XP_006539336.1  MORN repeat-containing protein 1 isoform X16

      See identical proteins and their annotated locations for XP_006539336.1

    24. XM_017320443.1 → XP_017175932.1  MORN repeat-containing protein 1 isoform X15

    25. XM_017320441.1 → XP_017175930.1  MORN repeat-containing protein 1 isoform X10

      Conserved Domains (1) summary
      COG4642
      Location:59 → 127
      COG4642; Uncharacterized conserved protein [Function unknown]

    RNA

    1. XR_003955051.2 RNA Sequence

    2. XR_003955052.2 RNA Sequence

    3. XR_003955047.2 RNA Sequence

    4. XR_003955041.2 RNA Sequence

    5. XR_003955043.2 RNA Sequence

    6. XR_003955048.2 RNA Sequence

    7. XR_003955042.2 RNA Sequence

    8. XR_003955037.2 RNA Sequence

    9. XR_003955040.2 RNA Sequence

    10. XR_003955038.2 RNA Sequence

    11. XR_004942009.1 RNA Sequence

    12. XR_003955044.2 RNA Sequence

    13. XR_003955046.2 RNA Sequence

    14. XR_003955045.2 RNA Sequence

    15. XR_003955049.2 RNA Sequence

    16. XR_003955050.2 RNA Sequence

    17. XR_001784216.2 RNA Sequence

    18. XR_003955039.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Chemical Information
    Molecular Biology Databases
    Research Materials
    Tools