U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    Abcc3 ATP-binding cassette, sub-family C member 3 [ Mus musculus (house mouse) ]

    Gene ID: 76408, updated on 27-Nov-2024

    Summary

    Official Symbol
    Abcc3provided by MGI
    Official Full Name
    ATP-binding cassette, sub-family C member 3provided by MGI
    Primary source
    MGI:MGI:1923658
    See related
    Ensembl:ENSMUSG00000020865 AllianceGenome:MGI:1923658
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MLP2; MRP3; ABC31; MOAT-D; 1700019L09Rik
    Summary
    Predicted to enable ABC-type transporter activity; glucuronoside transmembrane transporter activity; and icosanoid transmembrane transporter activity. Predicted to be involved in carboxylic acid transport; monoatomic anion transmembrane transport; and xenobiotic transmembrane transport. Predicted to act upstream of or within canalicular bile acid transport. Located in basolateral plasma membrane. Is expressed in alimentary system; embryo; liver; and small intestine. Orthologous to human ABCC3 (ATP binding cassette subfamily C member 3). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in liver adult (RPKM 63.1), colon adult (RPKM 54.5) and 14 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Abcc3 in Genome Data Viewer
    Location:
    11 D; 11 58.9 cM
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (94234121..94283843, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (94343295..94393017, complement)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene LUC7-like 3 (S. cerevisiae) Neighboring gene STARR-positive B cell enhancer ABC_E5270 Neighboring gene STARR-positive B cell enhancer ABC_E7046 Neighboring gene ankyrin repeat domain 40 Neighboring gene predicted gene, 51871 Neighboring gene CapStarr-seq enhancer MGSCv37_chr11:94235659-94235882 Neighboring gene STARR-seq mESC enhancer starr_30466 Neighboring gene STARR-seq mESC enhancer starr_30467 Neighboring gene calcium channel, voltage-dependent, T type, alpha 1G subunit Neighboring gene STARR-seq mESC enhancer starr_30468 Neighboring gene predicted gene, 51872 Neighboring gene STARR-positive B cell enhancer ABC_E10707 Neighboring gene spermatogenesis associated 20

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (2)  1 citation

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ABC-type bile acid transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables ABC-type bile acid transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables ABC-type glutathione S-conjugate transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables ABC-type glutathione S-conjugate transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables ABC-type xenobiotic transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables ABC-type xenobiotic transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATPase-coupled transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables ATPase-coupled transmembrane transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables glucuronoside transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables glucuronoside transmembrane transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables icosanoid transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables icosanoid transmembrane transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables xenobiotic transmembrane transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in bile acid and bile salt transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in bile acid and bile salt transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within canalicular bile acid transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in glucuronoside transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in leukotriene transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in leukotriene transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in monoatomic anion transmembrane transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in transmembrane transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in xenobiotic transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in xenobiotic transmembrane transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in xenobiotic transport ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in basal plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in basolateral plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in basolateral plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    ATP-binding cassette sub-family C member 3
    Names
    ATP-binding cassette protein C3
    ATP-binding cassette transporter
    ATP-binding cassette, sub-family C (CFTR/MRP), member 3
    canalicular multispecific organic anion transporter 2
    multidrug resistance-associated protein 3
    transporter
    NP_001350116.1
    NP_001350118.1
    NP_083876.3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001363187.1NP_001350116.1  ATP-binding cassette sub-family C member 3 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AL645965
      Consensus CDS
      CCDS88225.1
      UniProtKB/Swiss-Prot
      B2RX12, J3QML2, Q3U1W8, Q56PH0, Q59DK9, Q59DL0, Q5SUF4, Q80ZK8
      Related
      ENSMUSP00000136343.2, ENSMUST00000178136.8
      Conserved Domains (1) summary
      TIGR00957
      Location:71522
      MRP_assoc_pro; multi drug resistance-associated protein (MRP)
    2. NM_001363189.1NP_001350118.1  ATP-binding cassette sub-family C member 3 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AL645965
      Conserved Domains (1) summary
      cl26602
      Location:71497
      SunT; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
    3. NM_029600.4NP_083876.3  ATP-binding cassette sub-family C member 3 isoform 2

      See identical proteins and their annotated locations for NP_083876.3

      Status: VALIDATED

      Source sequence(s)
      AK149551, AL645965
      Consensus CDS
      CCDS25254.1
      UniProtKB/TrEMBL
      A0A0R4J015
      Related
      ENSMUSP00000021231.8, ENSMUST00000021231.8
      Conserved Domains (5) summary
      TIGR00957
      Location:71521
      MRP_assoc_pro; multi drug resistance-associated protein (MRP)
      cd03244
      Location:12821502
      ABCC_MRP_domain2; ATP-binding cassette domain 2 of multidrug resistance-associated protein
      cd03250
      Location:626827
      ABCC_MRP_domain1; ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C
      pfam00664
      Location:9761235
      ABC_membrane; ABC transporter transmembrane region
      cl00549
      Location:316577
      ABC_membrane; ABC transporter transmembrane region

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      94234121..94283843 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_879762.4 RNA Sequence