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    PLEKHA1 pleckstrin homology domain containing A1 [ Trachemys scripta elegans ]

    Gene ID: 117880649, updated on 19-Mar-2024

    Summary

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    Gene symbol
    PLEKHA1
    Gene description
    pleckstrin homology domain containing A1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Trachemys scripta elegans (sub-species: elegans)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Emydidae; Trachemys
    Orthologs
    human mouse all
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    Genomic context

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    See PLEKHA1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current CAS_Tse_1.0 (GCF_013100865.1) 7 NC_048304.1 (108041452..108124627, complement)

    Chromosome 7 - NC_048304.1Genomic Context describing neighboring genes Neighboring gene deleted in malignant brain tumors 1 protein-like Neighboring gene HtrA serine peptidase 1 Neighboring gene BTB domain containing 16 Neighboring gene transforming acidic coiled-coil containing protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_048304.1 Chromosome 7 Reference CAS_Tse_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Embryonic Transcriptome of the Red-Eared Slider Turtle (Trachemys scripta). Kaplinsky NJ, et al. PLoS One, 2013. PMID 23840449, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables PDZ domain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pleckstrin homology domain-containing family A member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Trachemys scripta elegans Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CAS_Tse_1.0 Primary Assembly

    Genomic

    1. NC_048304.1 Reference CAS_Tse_1.0 Primary Assembly

      Range
      108041452..108124627 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034777006.1 → XP_034632897.1  pleckstrin homology domain-containing family A member 1 isoform X7

    2. XM_034777009.1 → XP_034632900.1  pleckstrin homology domain-containing family A member 1 isoform X10

    3. XM_034777008.1 → XP_034632899.1  pleckstrin homology domain-containing family A member 1 isoform X9

    4. XM_034777003.1 → XP_034632894.1  pleckstrin homology domain-containing family A member 1 isoform X5

    5. XM_034777000.1 → XP_034632891.1  pleckstrin homology domain-containing family A member 1 isoform X2

    6. XM_034777005.1 → XP_034632896.1  pleckstrin homology domain-containing family A member 1 isoform X6

    7. XM_034777002.1 → XP_034632893.1  pleckstrin homology domain-containing family A member 1 isoform X4

    8. XM_034776998.1 → XP_034632889.1  pleckstrin homology domain-containing family A member 1 isoform X1

    9. XM_034777001.1 → XP_034632892.1  pleckstrin homology domain-containing family A member 1 isoform X3

    10. XM_034776999.1 → XP_034632890.1  pleckstrin homology domain-containing family A member 1 isoform X1

    11. XM_034777007.1 → XP_034632898.1  pleckstrin homology domain-containing family A member 1 isoform X8

    12. XM_034777010.1 → XP_034632901.1  pleckstrin homology domain-containing family A member 1 isoform X11

    Nucleotide Protein
    Heading Accession and Version

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