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    hypothetical protein (DUF626) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829076, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF626)
    Primary source
    TAIR:AT4G29550
    Locus tag
    AT4G29550
    See related
    Araport:AT4G29550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T16L4.60; T16L4_60
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (14502212..14503847)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene bacterial transferase hexapeptide repeat-containing protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene fanconi anemia group E protein FANCE protein Neighboring gene Cytidine/deoxycytidylate deaminase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001341973.1
    NM_119100.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF626)
    NP_567829.1
    • Protein of unknown function (DUF626); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF626, Arabidopsis thaliana (InterPro:IPR006462); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF626) (TAIR:AT3G44770.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14502212..14503847
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001341972.1 → NP_001328164.1  hypothetical protein (DUF626) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LFV1, Q9SU90
      UniProtKB/TrEMBL
      A0A178V1B0

    2. NM_119100.1 → NP_567829.1  hypothetical protein (DUF626) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567829.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LFV1, Q9SU90
      UniProtKB/TrEMBL
      A0A178V1B0
      Conserved Domains (1) summary
      TIGR01572
      Location:90 → 353
      A_thl_para_3677; Arabidopsis paralogous family TIGR01572

    3. NM_001341973.1 → NP_001328165.1  hypothetical protein (DUF626) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B3V6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LFV1.1

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