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    Cse1 chromosome segregation 1 [ Megalopta genalis ]

    Gene ID: 117228160, updated on 10-Oct-2024

    Summary

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    Gene symbol
    Cse1
    Gene description
    chromosome segregation 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Megalopta genalis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Halictidae; Halictinae; Augochlorini; Megalopta
    Orthologs
    fruit fly honey bee all
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    Genomic context

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    See Cse1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    100 current USU_MGEN_1.2 (GCF_011865705.1) Unplaced Scaffold NW_022891420.1 (1996007..2002562, complement)

    NW_022891420.1Genomic Context describing neighboring genes Neighboring gene kruppel homolog 1 Neighboring gene Acinus Neighboring gene transmembrane 9 superfamily protein member 2 Neighboring gene uncharacterized LOC117228163 Neighboring gene TBC1 domain family member 13

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022891420 Unplaced Scaffold Reference USU_MGEN_1.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Developmental Transcriptome for a Facultatively Eusocial Bee, Megalopta genalis. Jones BM, et al. G3 (Bethesda), 2015 Aug 14. PMID 26276382, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nuclear export signal receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein export from nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nuclear envelope IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    exportin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Megalopta genalis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USU_MGEN_1.2

    Genomic

    1. NW_022891420.1 Reference USU_MGEN_1.2

      Range
      1996007..2002562 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033483888.1 → XP_033339779.1  exportin-2

      Conserved Domains (3) summary
      pfam03378
      Location:528 → 960
      CAS_CSE1; CAS/CSE protein, C-terminus
      pfam08506
      Location:157 → 527
      Cse1
      pfam03810
      Location:29 → 103
      IBN_N; Importin-beta N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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