U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    PXN paxillin [ Petromyzon marinus (sea lamprey) ]

    Gene ID: 116939130, updated on 1-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    PXN
    Gene description
    paxillin
    See related
    EnsemblRapid:ENSPMAG00000045028
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Petromyzon marinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PXN in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current kPetMar1.pri (GCF_010993605.1) 5 NC_046073.1 (12107193..12162852)

    Chromosome 5 - NC_046073.1Genomic Context describing neighboring genes Neighboring gene 14-3-3 protein gamma-A-like Neighboring gene DEP domain containing 5, GATOR1 subcomplex subunit Neighboring gene transmembrane protein 132E-like Neighboring gene transmembrane protein 132E-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_046073.1 Chromosome 5 Reference kPetMar1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    paxillin

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Petromyzon marinus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference kPetMar1.pri Primary Assembly

    Genomic

    1. NC_046073.1 Reference kPetMar1.pri Primary Assembly

      Range
      12107193..12162852
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032947150.1 → XP_032803041.1  paxillin isoform X5

      UniProtKB/TrEMBL
      A0AAJ7SQR1
      Conserved Domains (4) summary
      cd09337
      Location:1079 → 1130
      LIM2_Paxillin_like; The second LIM domain of the paxillin like protein family
      cd09338
      Location:1138 → 1190
      LIM3_Paxillin_like; The third LIM domain of the paxillin like protein family
      cd09339
      Location:1197 → 1248
      LIM4_Paxillin_like; The fourth LIM domain of the Paxillin-like protein family
      cd09336
      Location:1020 → 1072
      LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family

    2. XM_032947147.1 → XP_032803038.1  paxillin isoform X2

      UniProtKB/TrEMBL
      A0AAJ7SP43
      Related
      ENSPMAP00000032955.1, ENSPMAT00000018947.1
      Conserved Domains (5) summary
      cd09337
      Location:1135 → 1186
      LIM2_Paxillin_like; The second LIM domain of the paxillin like protein family
      cd09338
      Location:1194 → 1246
      LIM3_Paxillin_like; The third LIM domain of the paxillin like protein family
      cd09339
      Location:1253 → 1304
      LIM4_Paxillin_like; The fourth LIM domain of the Paxillin-like protein family
      cd09336
      Location:1076 → 1128
      LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
      pfam03535
      Location:1 → 33
      Paxillin; Paxillin family

    3. XM_032947148.1 → XP_032803039.1  paxillin isoform X3

      UniProtKB/TrEMBL
      A0AAJ7SPU4
      Conserved Domains (5) summary
      cd09337
      Location:1130 → 1181
      LIM2_Paxillin_like; The second LIM domain of the paxillin like protein family
      cd09338
      Location:1189 → 1241
      LIM3_Paxillin_like; The third LIM domain of the paxillin like protein family
      cd09339
      Location:1248 → 1299
      LIM4_Paxillin_like; The fourth LIM domain of the Paxillin-like protein family
      cd09336
      Location:1071 → 1123
      LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
      pfam03535
      Location:1 → 33
      Paxillin; Paxillin family

    4. XM_032947146.1 → XP_032803037.1  paxillin isoform X1

      UniProtKB/TrEMBL
      A0AAJ7SPA9
      Conserved Domains (5) summary
      cd09337
      Location:1136 → 1187
      LIM2_Paxillin_like; The second LIM domain of the paxillin like protein family
      cd09338
      Location:1195 → 1247
      LIM3_Paxillin_like; The third LIM domain of the paxillin like protein family
      cd09339
      Location:1254 → 1305
      LIM4_Paxillin_like; The fourth LIM domain of the Paxillin-like protein family
      cd09336
      Location:1077 → 1129
      LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
      pfam03535
      Location:1 → 33
      Paxillin; Paxillin family

    5. XM_032947145.1 → XP_032803036.1  paxillin isoform X1

      UniProtKB/TrEMBL
      A0AAJ7SPA9
      Conserved Domains (5) summary
      cd09337
      Location:1136 → 1187
      LIM2_Paxillin_like; The second LIM domain of the paxillin like protein family
      cd09338
      Location:1195 → 1247
      LIM3_Paxillin_like; The third LIM domain of the paxillin like protein family
      cd09339
      Location:1254 → 1305
      LIM4_Paxillin_like; The fourth LIM domain of the Paxillin-like protein family
      cd09336
      Location:1077 → 1129
      LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
      pfam03535
      Location:1 → 33
      Paxillin; Paxillin family

    6. XM_032947149.1 → XP_032803040.1  paxillin isoform X4

      UniProtKB/TrEMBL
      A0AAJ7SQN5
      Related
      ENSPMAP00000017901.1, ENSPMAT00000040608.1
      Conserved Domains (5) summary
      cd09337
      Location:1107 → 1158
      LIM2_Paxillin_like; The second LIM domain of the paxillin like protein family
      cd09338
      Location:1166 → 1218
      LIM3_Paxillin_like; The third LIM domain of the paxillin like protein family
      cd09339
      Location:1225 → 1276
      LIM4_Paxillin_like; The fourth LIM domain of the Paxillin-like protein family
      cd09336
      Location:1048 → 1100
      LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
      pfam03535
      Location:1 → 33
      Paxillin; Paxillin family

    7. XM_032947151.1 → XP_032803042.1  paxillin isoform X6

      UniProtKB/TrEMBL
      A0AAJ7SR88
      Conserved Domains (5) summary
      cd09337
      Location:572 → 623
      LIM2_Paxillin_like; The second LIM domain of the paxillin like protein family
      cd09338
      Location:631 → 683
      LIM3_Paxillin_like; The third LIM domain of the paxillin like protein family
      cd09339
      Location:690 → 741
      LIM4_Paxillin_like; The fourth LIM domain of the Paxillin-like protein family
      cd09336
      Location:513 → 565
      LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
      pfam03535
      Location:1 → 33
      Paxillin; Paxillin family

    8. XM_032947152.1 → XP_032803043.1  paxillin isoform X7

      UniProtKB/TrEMBL
      A0AAJ7SQZ8
      Conserved Domains (5) summary
      cd09337
      Location:312 → 363
      LIM2_Paxillin_like; The second LIM domain of the paxillin like protein family
      cd09338
      Location:371 → 423
      LIM3_Paxillin_like; The third LIM domain of the paxillin like protein family
      cd09339
      Location:430 → 481
      LIM4_Paxillin_like; The fourth LIM domain of the Paxillin-like protein family
      cd09336
      Location:253 → 305
      LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
      pfam03535
      Location:1 → 76
      Paxillin; Paxillin family

    9. XM_032947153.1 → XP_032803044.1  paxillin isoform X8

      UniProtKB/TrEMBL
      A0AAJ7WMA9
      Conserved Domains (5) summary
      cd09337
      Location:283 → 334
      LIM2_Paxillin_like; The second LIM domain of the paxillin like protein family
      cd09338
      Location:342 → 394
      LIM3_Paxillin_like; The third LIM domain of the paxillin like protein family
      cd09339
      Location:401 → 452
      LIM4_Paxillin_like; The fourth LIM domain of the Paxillin-like protein family
      cd09336
      Location:224 → 276
      LIM1_Paxillin_like; The first LIM domain of the paxillin like protein family
      pfam03535
      Location:1 → 76
      Paxillin; Paxillin family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.