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    TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 [ Mustela erminea (ermine) ]

    Gene ID: 116572891, updated on 18-Mar-2024

    Summary

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    Gene symbol
    TIAL1
    Gene description
    TIA1 cytotoxic granule associated RNA binding protein like 1
    See related
    EnsemblRapid:ENSMERG00000011343
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mustela erminea
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
    Orthologs
    human mouse all
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    Genomic context

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    See TIAL1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    100 current mMusErm1.Pri (GCF_009829155.1) 14 NC_045627.1 (80755042..80775883, complement)

    Chromosome 14 - NC_045627.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor kinase 5 Neighboring gene regulator of G protein signaling 10 Neighboring gene uncharacterized LOC116573699 Neighboring gene BAG cochaperone 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045627.1 Chromosome 14 Reference mMusErm1.Pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nucleolysin TIAR

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mustela erminea Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mMusErm1.Pri Primary Assembly

    Genomic

    1. NC_045627.1 Reference mMusErm1.Pri Primary Assembly

      Range
      80755042..80775883 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032312312.1 → XP_032168203.1  nucleolysin TIAR isoform X2

      Conserved Domains (3) summary
      cd12620
      Location:205 → 277
      RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
      cd12616
      Location:10 → 90
      RRM1_TIAR; RNA recognition motif 1 (RRM1) found in nucleolysin TIAR and similar proteins
      cd12617
      Location:96 → 175
      RRM2_TIAR; RNA recognition motif 2 (RRM2) found in nucleolysin TIAR and similar proteins

    2. XM_032312311.1 → XP_032168202.1  nucleolysin TIAR isoform X1

      Related
      ENSMERP00000018805.1, ENSMERT00000020918.1
      Conserved Domains (3) summary
      cd12620
      Location:222 → 294
      RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
      cd12616
      Location:10 → 107
      RRM1_TIAR; RNA recognition motif 1 (RRM1) found in nucleolysin TIAR and similar proteins
      cd12617
      Location:113 → 192
      RRM2_TIAR; RNA recognition motif 2 (RRM2) found in nucleolysin TIAR and similar proteins

    3. XM_032312313.1 → XP_032168204.1  nucleolysin TIAR isoform X3

      Conserved Domains (3) summary
      cd12620
      Location:183 → 255
      RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
      cd12617
      Location:74 → 153
      RRM2_TIAR; RNA recognition motif 2 (RRM2) found in nucleolysin TIAR and similar proteins
      cl17169
      Location:19 → 68
      RRM_SF; RNA recognition motif (RRM) superfamily

    4. XM_032312315.1 → XP_032168206.1  nucleolysin TIAR isoform X3

      Conserved Domains (3) summary
      cd12620
      Location:183 → 255
      RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
      cd12617
      Location:74 → 153
      RRM2_TIAR; RNA recognition motif 2 (RRM2) found in nucleolysin TIAR and similar proteins
      cl17169
      Location:19 → 68
      RRM_SF; RNA recognition motif (RRM) superfamily

    5. XM_032312316.1 → XP_032168207.1  nucleolysin TIAR isoform X4

      Conserved Domains (3) summary
      cd12620
      Location:166 → 238
      RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
      cd12617
      Location:57 → 136
      RRM2_TIAR; RNA recognition motif 2 (RRM2) found in nucleolysin TIAR and similar proteins
      cl17169
      Location:1 → 51
      RRM_SF; RNA recognition motif (RRM) superfamily

    6. XM_032312314.1 → XP_032168205.1  nucleolysin TIAR isoform X3

      Conserved Domains (3) summary
      cd12620
      Location:183 → 255
      RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
      cd12617
      Location:74 → 153
      RRM2_TIAR; RNA recognition motif 2 (RRM2) found in nucleolysin TIAR and similar proteins
      cl17169
      Location:19 → 68
      RRM_SF; RNA recognition motif (RRM) superfamily

    7. XM_032312320.1 → XP_032168211.1  nucleolysin TIAR isoform X7

      Conserved Domains (2) summary
      cd12620
      Location:82 → 154
      RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
      cl17169
      Location:2 → 52
      RRM_SF; RNA recognition motif (RRM) superfamily

    8. XM_032312317.1 → XP_032168208.1  nucleolysin TIAR isoform X5

      Conserved Domains (3) summary
      cd12620
      Location:222 → 294
      RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
      cd12616
      Location:10 → 107
      RRM1_TIAR; RNA recognition motif 1 (RRM1) found in nucleolysin TIAR and similar proteins
      cd12617
      Location:113 → 192
      RRM2_TIAR; RNA recognition motif 2 (RRM2) found in nucleolysin TIAR and similar proteins

    9. XM_032312318.1 → XP_032168209.1  nucleolysin TIAR isoform X5

      Related
      ENSMERP00000018816.1, ENSMERT00000020929.1
      Conserved Domains (3) summary
      cd12620
      Location:222 → 294
      RRM3_TIAR; RNA recognition motif 3 (RRM3) found in nucleolysin TIAR and similar proteins
      cd12616
      Location:10 → 107
      RRM1_TIAR; RNA recognition motif 1 (RRM1) found in nucleolysin TIAR and similar proteins
      cd12617
      Location:113 → 192
      RRM2_TIAR; RNA recognition motif 2 (RRM2) found in nucleolysin TIAR and similar proteins

    10. XM_032312319.1 → XP_032168210.1  nucleolysin TIAR isoform X6

      Conserved Domains (3) summary
      cd12616
      Location:10 → 107
      RRM1_TIAR; RNA recognition motif 1 (RRM1) found in nucleolysin TIAR and similar proteins
      cd12617
      Location:113 → 192
      RRM2_TIAR; RNA recognition motif 2 (RRM2) found in nucleolysin TIAR and similar proteins
      cl17169
      Location:222 → 263
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein
    Heading Accession and Version

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