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    CG15084 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37178, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG15084provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0034402
    Locus tag
    Dmel_CG15084
    See related
    AllianceGenome:FB:FBgn0034402
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG15084
    Summary
    Predicted to be involved in RNA splicing. Predicted to be part of U2-type spliceosomal complex and post-mRNA release spliceosomal complex. Is expressed in organism. Orthologous to human YJU2B (YJU2 splicing factor homolog B). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG15084 in Genome Data Viewer
    Location:
    55F7-55F7; 2-86 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18850844..18851963)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14738349..14739468)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Methionyl-tRNA synthetase Neighboring gene antisense RNA:CR46485 Neighboring gene uncharacterized protein Neighboring gene Juvenile hormone epoxide hydrolase 1 Neighboring gene Juvenile hormone epoxide hydrolase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. RACK1 modulates polyglutamine-induced neurodegeneration by promoting ERK degradation in Drosophila. Xie J, et al. PLoS Genet, 2021 May. PMID 33983927, Free PMC Article
    2. Conserved regulators of nucleolar size revealed by global phenotypic analyses. Neumüller RA, et al. Sci Signal, 2013 Aug 20. PMID 23962978, Free PMC Article
    3. In vivo profiling of the Zucchini proximal proteome in the Drosophila ovary. Nguyen TTM, et al. Development, 2023 Feb 15. PMID 36762624
    4. Comparative interactome analysis of α-arrestin families in human and Drosophila. Lee KT, et al. Elife, 2024 Jan 25. PMID 38270169, Free PMC Article
    5. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in RNA splicing IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of U2-type spliceosomal complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of post-mRNA release spliceosomal complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG15084-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      18850844..18851963
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137539.4 → NP_611383.1  uncharacterized protein Dmel_CG15084 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611383.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7K0F0
      Related
      FBpp0085801
      Conserved Domains (2) summary
      COG5134
      Location:8 → 253
      COG5134; Uncharacterized conserved protein [Function unknown]
      pfam04502
      Location:8 → 239
      DUF572; Family of unknown function (DUF572)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7K0F0.1 Q7K0F0

    Gene LinkOut

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