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    BTBD2 BTB domain containing 2 [ Sarcophilus harrisii (Tasmanian devil) ]

    Gene ID: 100917564, updated on 8-Mar-2024

    Summary

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    Gene symbol
    BTBD2
    Gene description
    BTB domain containing 2
    See related
    Ensembl:ENSSHAG00000020860
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sarcophilus harrisii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
    Orthologs
    human mouse all
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    Genomic context

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    See BTBD2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current mSarHar1.11 (GCF_902635505.1) 1 NC_045426.1 (665660367..665721659)
    102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 2 Unlocalized Scaffold NW_003823431.1 (300654..352944, complement)

    Chromosome 1 - NC_045426.1Genomic Context describing neighboring genes Neighboring gene MOB kinase activator 3A Neighboring gene MAPK interacting serine/threonine kinase 2 Neighboring gene uncharacterized LOC116420792 Neighboring gene uncharacterized LOC116420791 Neighboring gene casein kinase 1 gamma 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in neurogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BTB/POZ domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mSarHar1.11 Primary Assembly

    Genomic

    1. NC_045426.1 Reference mSarHar1.11 Primary Assembly

      Range
      665660367..665721659
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023496848.2 → XP_023352616.2  BTB/POZ domain-containing protein 2

      UniProtKB/TrEMBL
      A0A7N4PGZ3, A0A7N4V7J7
      Related
      ENSSHAP00000045198.1, ENSSHAT00000032926.1
      Conserved Domains (3) summary
      cd18281
      Location:172 → 298
      BTB_POZ_BTBD1_2; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing proteins, BTBD1 and BTBD2
      cd18523
      Location:294 → 399
      BACK_BTBD2; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 2 (BTBD2)
      pfam08005
      Location:452 → 601
      PHR; PHR domain
    Nucleotide Protein
    Heading Accession and Version

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