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    vtg3 vitellogenin 3, phosvitinless [ Anarrhichthys ocellatus (wolf-eel) ]

    Gene ID: 116392557, updated on 18-Mar-2024

    Summary

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    Gene symbol
    vtg3
    Gene description
    vitellogenin 3, phosvitinless
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anarrhichthys ocellatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Zoarcales; Anarhichadidae; Anarrhichthys
    Orthologs
    zebrafish all
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    Genomic context

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    See vtg3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    100 current GSC_Weel_1.0 (GCF_004355925.1) Unplaced Scaffold NW_022280060.1 (307243..318467, complement)

    NW_022280060.1Genomic Context describing neighboring genes Neighboring gene zinc finger, RAN-binding domain containing 2 Neighboring gene neuronal growth regulator 1 Neighboring gene adhesion G protein-coupled receptor L4 Neighboring gene adhesion G protein-coupled receptor L2a

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022280060 Unplaced Scaffold Reference GSC_Weel_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lipid transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vitellogenin-like

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Anarrhichthys ocellatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GSC_Weel_1.0 Primary Assembly

    Genomic

    1. NW_022280060.1 Reference GSC_Weel_1.0 Primary Assembly

      Range
      307243..318467 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031864132.1 → XP_031719992.1  vitellogenin-like isoform X2

      Conserved Domains (3) summary
      smart00638
      Location:24 → 592
      LPD_N; Lipoprotein N-terminal Domain
      pfam09172
      Location:626 → 907
      DUF1943; Domain of unknown function (DUF1943)
      pfam09175
      Location:1084 → 1250
      DUF1944; Domain of unknown function (DUF1944)

    2. XM_031864131.1 → XP_031719991.1  vitellogenin-like isoform X1

      Conserved Domains (3) summary
      smart00638
      Location:24 → 592
      LPD_N; Lipoprotein N-terminal Domain
      pfam09172
      Location:626 → 907
      DUF1943; Domain of unknown function (DUF1943)
      pfam09175
      Location:1087 → 1253
      DUF1944; Domain of unknown function (DUF1944)
    Nucleotide Protein
    Heading Accession and Version

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