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    LOC115962330 laccase-14-like [ Quercus lobata ]

    Gene ID: 115962330, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC115962330
    Gene description
    laccase-14-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Quercus lobata
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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    Genomic context

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    See LOC115962330 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current ValleyOak3.0 (GCF_001633185.1) 9 NC_044912.1 (10675850..10682085)

    Chromosome 9 - NC_044912.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115961208 Neighboring gene uncharacterized LOC115961209 Neighboring gene abscisic acid receptor PYL8 Neighboring gene ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_044912.1 Chromosome 9 Reference ValleyOak3.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables copper ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hydroquinone:oxygen oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lignin catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apoplast IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    laccase-14-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Quercus lobata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ValleyOak3.0

    Genomic

    1. NC_044912.1 Reference ValleyOak3.0

      Range
      10675850..10682085
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031081243.1 → XP_030937103.1  laccase-14-like

      UniProtKB/TrEMBL
      A0A7N2MIA0
      Conserved Domains (1) summary
      TIGR03389
      Location:23 → 565
      laccase; plant
    Nucleotide Protein
    Heading Accession and Version

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