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    K01A2.10 CCDC92 domain-containing protein;CCDC92/74 N-terminal domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 173422, updated on 9-Dec-2024

    Summary

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    Official Symbol
    K01A2.10
    Official Full Name
    CCDC92 domain-containing protein;CCDC92/74 N-terminal domain-containing protein
    Primary source
    WormBase:WBGene00019284
    Locus tag
    CELE_K01A2.10
    See related
    AllianceGenome:WB:WBGene00019284
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Orthologous to human CCDC92 (coiled-coil domain containing 92). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See K01A2.10 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    3
    Sequence:
    Chromosome: II; NC_003280.10 (321442..323098, complement)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene MiRP K channel accessory Subunit Neighboring gene ncRNA Neighboring gene Fatty Acid/Retinol binding protein Neighboring gene Beta-sarcoglycan Neighboring gene EF-hand domain-containing protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. UNC-83 coordinates kinesin-1 and dynein activities at the nuclear envelope during nuclear migration. Fridolfsson HN, et al. Dev Biol, 2010 Feb 15. PMID 20005871, Free PMC Article
    2. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Reboul J, et al. Nat Genet, 2003 May. PMID 12679813
    3. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    4. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    CCDC92 domain-containing protein;CCDC92/74 N-terminal domain-containing protein
    NP_001300556.1
    • Confirmed by transcript evidence
    NP_493709.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      321442..323098 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_061308.4 → NP_493709.1  CCDC92/74 N-terminal domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493709.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9TZ50
      Conserved Domains (2) summary
      pfam10046
      Location:83 → 139
      BLOC1_2; Biogenesis of lysosome-related organelles complex-1 subunit 2
      cl01090
      Location:143 → 190
      SlyX; SlyX

    2. NM_001313627.3 → NP_001300556.1  CCDC92 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0K3AUL9
    Nucleotide Protein
    Heading Accession and Version

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