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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001098416.4 → NP_001091886.1 histone deacetylase 7 isoform d
See identical proteins and their annotated locations for NP_001091886.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an alternate in-frame exon in the mid-coding region, compared to variant 1. The resulting isoform (d) has the same N- and C-termini but is shorter than isoform a.
- Source sequence(s)
-
BC020505, BC064840, DC376749
- Consensus CDS
-
CCDS41776.1
- UniProtKB/TrEMBL
-
J3KPH8
- Related
- ENSP00000351326.3, ENST00000354334.7
- Conserved Domains (1) summary
-
- cd10008
Location:520 → 897
- HDAC7; Histone deacetylase 7
-
NM_001308090.2 → NP_001295019.1 histone deacetylase 7 isoform e
See identical proteins and their annotated locations for NP_001295019.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks an alternate in-frame exon in the 5' coding region, compared to variant 1. The resulting isoform (e) has the same N- and C-termini but is shorter than isoform a.
- Source sequence(s)
-
AK122588, AK299292, AK303481, BM144303, DC376749
- Consensus CDS
-
CCDS81685.1
- UniProtKB/TrEMBL
-
J3KPH8
- Related
- ENSP00000448532.1, ENST00000552960.5
- Conserved Domains (1) summary
-
- cd10008
Location:540 → 917
- HDAC7; Histone deacetylase 7
-
NM_001368046.1 → NP_001354975.1 histone deacetylase 7 isoform f
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) encodes the longest isoform (f).
- Source sequence(s)
-
AC004466
- UniProtKB/TrEMBL
-
J3KPH8
-
NM_015401.5 → NP_056216.2 histone deacetylase 7 isoform a
See identical proteins and their annotated locations for NP_056216.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1, also known as variant 3) encodes isoform a (also known as isoform c).
- Source sequence(s)
-
AY302468, BC020505, DC376749
- Consensus CDS
-
CCDS8756.2
- UniProtKB/TrEMBL
-
J3KPH8
- Related
- ENSP00000080059.7, ENST00000080059.12
- Conserved Domains (1) summary
-
- cd10008
Location:557 → 934
- HDAC7; Histone deacetylase 7
RNA
-
NR_160435.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC004466
- Related
-
ENST00000470668.5
-
NR_160436.1 RNA Sequence
Status: REVIEWED
- Source sequence(s)
-
AC004466
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000012.12 Reference GRCh38.p14 Primary Assembly
- Range
-
47782722..47821344 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047428980.1 → XP_047284936.1 histone deacetylase 7 isoform X6
- UniProtKB/TrEMBL
-
J3KPH8
-
XM_047428979.1 → XP_047284935.1 histone deacetylase 7 isoform X5
- UniProtKB/TrEMBL
-
J3KPH8
-
XM_011538481.2 → XP_011536783.2 histone deacetylase 7 isoform X1
- UniProtKB/TrEMBL
-
J3KPH8
-
XM_047428983.1 → XP_047284939.1 histone deacetylase 7 isoform X9
- UniProtKB/TrEMBL
-
J3KPH8
-
XM_047428978.1 → XP_047284934.1 histone deacetylase 7 isoform X2
- UniProtKB/TrEMBL
-
J3KPH8
-
XM_024449018.2 → XP_024304786.1 histone deacetylase 7 isoform X3
- UniProtKB/TrEMBL
-
J3KPH8
- Conserved Domains (1) summary
-
- cd10008
Location:564 → 941
- HDAC7; Histone deacetylase 7
-
XM_047428981.1 → XP_047284937.1 histone deacetylase 7 isoform X7
- UniProtKB/TrEMBL
-
J3KPH8
-
XM_011538480.1 → XP_011536782.1 histone deacetylase 7 isoform X4
- UniProtKB/TrEMBL
-
J3KPH8
- Conserved Domains (1) summary
-
- cd10008
Location:564 → 941
- HDAC7; Histone deacetylase 7
-
XM_047428982.1 → XP_047284938.1 histone deacetylase 7 isoform X8
- UniProtKB/Swiss-Prot
- B3KY08, B4DWI0, B4E0Q5, Q6P1W9, Q6W9G7, Q7Z4K2, Q7Z5I1, Q8WUI4, Q96K01, Q9BR73, Q9H7L0, Q9NW41, Q9NWA9, Q9NYK9, Q9UFU7
- UniProtKB/TrEMBL
-
J3KPH8
- Related
- ENSP00000404394.2, ENST00000427332.6
-
XM_047428984.1 → XP_047284940.1 histone deacetylase 7 isoform X8
- UniProtKB/Swiss-Prot
- B3KY08, B4DWI0, B4E0Q5, Q6P1W9, Q6W9G7, Q7Z4K2, Q7Z5I1, Q8WUI4, Q96K01, Q9BR73, Q9H7L0, Q9NW41, Q9NWA9, Q9NYK9, Q9UFU7
- UniProtKB/TrEMBL
-
J3KPH8
-
XM_011538483.1 → XP_011536785.1 histone deacetylase 7 isoform X10
Alternate T2T-CHM13v2.0
Genomic
-
NC_060936.1 Alternate T2T-CHM13v2.0
- Range
-
47744115..47782739 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054372249.1 → XP_054228224.1 histone deacetylase 7 isoform X6
- UniProtKB/TrEMBL
-
J3KPH8
-
XM_054372248.1 → XP_054228223.1 histone deacetylase 7 isoform X5
- UniProtKB/TrEMBL
-
J3KPH8
-
XM_054372244.1 → XP_054228219.1 histone deacetylase 7 isoform X1
- UniProtKB/TrEMBL
-
J3KPH8
-
XM_054372252.1 → XP_054228227.1 histone deacetylase 7 isoform X9
- UniProtKB/TrEMBL
-
J3KPH8
-
XM_054372245.1 → XP_054228220.1 histone deacetylase 7 isoform X2
- UniProtKB/TrEMBL
-
J3KPH8
-
XM_054372246.1 → XP_054228221.1 histone deacetylase 7 isoform X3
- UniProtKB/TrEMBL
-
J3KPH8
-
XM_054372250.1 → XP_054228225.1 histone deacetylase 7 isoform X7
- UniProtKB/TrEMBL
-
J3KPH8
-
XM_054372247.1 → XP_054228222.1 histone deacetylase 7 isoform X4
- UniProtKB/TrEMBL
-
J3KPH8
-
XM_054372251.1 → XP_054228226.1 histone deacetylase 7 isoform X8
- UniProtKB/Swiss-Prot
- B3KY08, B4DWI0, B4E0Q5, Q6P1W9, Q6W9G7, Q7Z4K2, Q7Z5I1, Q8WUI4, Q96K01, Q9BR73, Q9H7L0, Q9NW41, Q9NWA9, Q9NYK9, Q9UFU7
- UniProtKB/TrEMBL
-
J3KPH8
-
XM_054372253.1 → XP_054228228.1 histone deacetylase 7 isoform X8
- UniProtKB/Swiss-Prot
- B3KY08, B4DWI0, B4E0Q5, Q6P1W9, Q6W9G7, Q7Z4K2, Q7Z5I1, Q8WUI4, Q96K01, Q9BR73, Q9H7L0, Q9NW41, Q9NWA9, Q9NYK9, Q9UFU7
- UniProtKB/TrEMBL
-
J3KPH8
-
XM_054372254.1 → XP_054228229.1 histone deacetylase 7 isoform X10
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_016596.3: Suppressed sequence
- Description
- NM_016596.3: This RefSeq was temporarily suppressed because the CDS was partial.