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    LTP3 lipid transfer protein 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836051, updated on 18-Sep-2024

    Summary

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    Official Symbol
    LTP3
    Official Full Name
    lipid transfer protein 3
    Primary source
    TAIR:AT5G59320
    Locus tag
    AT5G59320
    See related
    Araport:AT5G59320
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    lipid transfer protein 3; MNC17.10; MNC17_10
    Summary
    Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.
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    Genomic context

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    See LTP3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (23928954..23929816)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene CLAVATA 3/ESR (CLE)-like protein Neighboring gene lipid transfer protein 4 Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene WUSCHEL related homeobox 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. On the role of a Lipid-Transfer Protein. Arabidopsis ltp3 mutant is compromised in germination and seedling growth. Pagnussat LA, et al. Plant Signal Behav, 2015. PMID 26479260, Free PMC Article
    2. LTP3 contributes to disease susceptibility in Arabidopsis by enhancing abscisic acid (ABA) biosynthesis. Gao S, et al. Mol Plant Pathol, 2016 Apr. PMID 26123657, Free PMC Article
    3. Lipid transfer protein 3 as a target of MYB96 mediates freezing and drought stress in Arabidopsis. Guo L, et al. J Exp Bot, 2013 Apr. PMID 23404903, Free PMC Article
    4. Lipid transfer proteins are encoded by a small multigene family in Arabidopsis thaliana. Arondel12 V V, et al. Plant Sci, 2000 Aug 8. PMID 10940464
    5. The relationship of drought-related gene expression in Arabidopsis thaliana to hormonal and environmental factors. Huang D, et al. J Exp Bot, 2008. PMID 18552355, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. LTP3 is a novel negative regulator of plant immunity which acts through the manipulation of the abscissic acid-salicylic acid balance.
      Title: LTP3 contributes to disease susceptibility in Arabidopsis by enhancing abscisic acid (ABA) biosynthesis.
    2. The involvement of LTP3 in germination and seedling growth and its relationship with the lipid transfer ability of this protein is discussed.
      Title: On the role of a Lipid-Transfer Protein. Arabidopsis ltp3 mutant is compromised in germination and seedling growth.
    3. Alteration in LTP3 expression affects plant responses to drought and oxidative stress.
      Title: Lipid transfer protein 3 as a target of MYB96 mediates freezing and drought stress in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_125323.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in lipid transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to abscisic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to water deprivation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apoplast HDA PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type cell wall TAS
    Traceable Author Statement
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lipid transfer protein 3
    NP_568905.1
    • lipid transfer protein 3 (LTP3); FUNCTIONS IN: lipid binding; INVOLVED IN: response to water deprivation, response to abscisic acid stimulus; LOCATED IN: cell wall, apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: lipid transfer protein 4 (TAIR:AT5G59310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      23928954..23929816
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125323.5 → NP_568905.1  lipid transfer protein 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568905.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L9A3, Q9FIE6, Q9LLR7
      UniProtKB/TrEMBL
      A0A178UNU9, A0A5S9YFH2
      Conserved Domains (1) summary
      cd01960
      Location:25 → 112
      nsLTP1; Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LLR7.1

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