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    POLD3 DNA-directed DNA polymerase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844201, updated on 18-Sep-2024

    Summary

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    Official Symbol
    POLD3
    Official Full Name
    DNA-directed DNA polymerase
    Primary source
    TAIR:AT1G78650
    Locus tag
    AT1G78650
    See related
    Araport:AT1G78650
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T30F21.2; T30F21_2
    Summary
    Similar to DNA polymerase delta (POLD3), which in other organism was shown to be involved in the elongation of DNA replication.
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    Genomic context

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    See POLD3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (29582907..29585665)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene B3 domain protein Neighboring gene B3 domain protein Neighboring gene gamma-glutamyl hydrolase 1 Neighboring gene gamma-glutamyl hydrolase 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-wide analysis of the core DNA replication machinery in the higher plants Arabidopsis and rice. Shultz RW, et al. Plant Physiol, 2007 Aug. PMID 17556508, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_106512.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-directed DNA polymerase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA strand elongation involved in DNA replication TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of delta DNA polymerase complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DNA-directed DNA polymerase
    NP_565185.1
    • POLD3; FUNCTIONS IN: DNA-directed DNA polymerase activity; INVOLVED IN: DNA strand elongation involved in DNA replication; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: DNA polymerase subunit Cdc27 (InterPro:IPR019038); Has 2595 Blast hits to 2034 proteins in 330 species: Archae - 0; Bacteria - 228; Metazoa - 1072; Fungi - 424; Plants - 126; Viruses - 27; Other Eukaryotes - 718 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29582907..29585665
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106512.3 → NP_565185.1  DNA-directed DNA polymerase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565185.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WL11, A0A5S9WVH6, A0A654ERR9, Q9SYL7
      Conserved Domains (1) summary
      pfam09507
      Location:23 → 508
      CDC27; DNA polymerase subunit Cdc27
    Nucleotide Protein
    Heading Accession and Version

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