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    Glucose-methanol-choline (GMC) oxidoreductase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835270, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Glucose-methanol-choline (GMC) oxidoreductase family protein
    Primary source
    TAIR:AT5G51950
    Locus tag
    AT5G51950
    See related
    Araport:AT5G51950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MSG15.3; MSG15_3
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (21105909..21108710, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Pyridoxal phosphate (PLP)-dependent transferases superfamily protein Neighboring gene Glucose-methanol-choline (GMC) oxidoreductase family protein Neighboring gene RNA polymerase Rpb6 Neighboring gene complex 1 protein, LYR family protein Neighboring gene GroES-like zinc-binding alcohol dehydrogenase family protein Neighboring gene Transducin/WD40 repeat-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001344969.1
    NM_001344970.1
    NM_124574.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on CH-OH group of donors IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Glucose-methanol-choline (GMC) oxidoreductase family protein
    NP_001318783.1
    • Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT3G56060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_200008.1
    • Glucose-methanol-choline (GMC) oxidoreductase family protein; FUNCTIONS IN: aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors, FAD binding; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Glucose-methanol-choline oxidoreductase, N-terminal (InterPro:IPR000172), Glucose-methanol-choline oxidoreductase (InterPro:IPR012132), Glucose-methanol-choline oxidoreductase, C-terminal (InterPro:IPR007867); BEST Arabidopsis thaliana protein match is: Glucose-methanol-choline (GMC) oxidoreductase family protein (TAIR:AT3G56060.1); Has 10743 Blast hits to 10416 proteins in 1097 species: Archae - 4; Bacteria - 3990; Metazoa - 824; Fungi - 1486; Plants - 311; Viruses - 15; Other Eukaryotes - 4113 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      21105909..21108710 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124574.4 → NP_200008.1  Glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200008.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UQ06, Q94KD2
      Conserved Domains (3) summary
      PLN02785
      Location:10 → 576
      PLN02785; Protein HOTHEAD
      pfam05199
      Location:421 → 565
      GMC_oxred_C; GMC oxidoreductase
      cl21454
      Location:46 → 310
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    2. NM_001344970.1 → NP_001332516.1  Glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BHC1, A0A5S9YDB9

    3. NM_001344969.1 → NP_001318783.1  Glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UP05, F4KEQ8
    Nucleotide Protein
    Heading Accession and Version

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