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    C5orf35 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830723, updated on 18-Sep-2024

    Summary

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    Official Full Name
    C5orf35
    Primary source
    TAIR:AT5G08270
    Locus tag
    AT5G08270
    See related
    Araport:AT5G08270
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F8L15.1; F8L15_1
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (2661642..2663627)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Cytochrome P450 superfamily protein Neighboring gene serine carboxypeptidase-like 35 Neighboring gene hydroxymethylbilane synthase Neighboring gene ncRNA Neighboring gene mRNA splicing factor, thioredoxin-like U5 snRNP

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_120910.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    C5orf35
    NP_196444.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23200.1); Has 89 Blast hits to 86 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 27; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2661642..2663627
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120910.3 → NP_196444.1  C5orf35 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196444.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178U965, F4K9N6, Q8GW76
      Conserved Domains (1) summary
      cd10537
      Location:149 → 371
      SET_SETD9; SET domain found in SET domain-containing protein 9 (SETD9) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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