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    GPLD1 glycosylphosphatidylinositol specific phospholipase D1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 707782, updated on 14-Nov-2024

    Summary

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    Official Symbol
    GPLD1provided by VGNC
    Official Full Name
    glycosylphosphatidylinositol specific phospholipase D1provided by VGNC
    Primary source
    VGNC:VGNC:73120
    See related
    Ensembl:ENSMMUG00000022119
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See GPLD1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 4 NC_041757.1 (145492558..145558724)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 4 NC_027896.1 (24964619..25029537, complement)

    Chromosome 4 - NC_041757.1Genomic Context describing neighboring genes Neighboring gene KIAA0319 Neighboring gene uncharacterized LOC106997846 Neighboring gene 60S ribosomal protein L7a pseudogene Neighboring gene aldehyde dehydrogenase 5 family member A1 Neighboring gene magnesium transporter MRS2 Neighboring gene U6 spliceosomal RNA Neighboring gene 40S ribosomal protein S23 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycosylphosphatidylinositol phospholipase D activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatidylinositol-glycan-specific phospholipase D

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041757.1 Reference Mmul_10 Primary Assembly

      Range
      145492558..145558724
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028847810.1 → XP_028703643.1  phosphatidylinositol-glycan-specific phospholipase D isoform X1

      UniProtKB/TrEMBL
      F7H5Q6
      Related
      ENSMMUP00000029127.4, ENSMMUT00000031118.4
      Conserved Domains (3) summary
      smart00191
      Location:462 → 518
      Int_alpha; Integrin alpha (beta-propellor repeats)
      pfam00882
      Location:44 → 227
      Zn_dep_PLPC; Zinc dependent phospholipase C
      pfam01839
      Location:530 → 557
      FG-GAP; FG-GAP repeat

    2. XM_015135675.2 → XP_014991161.2  phosphatidylinositol-glycan-specific phospholipase D isoform X3

      Conserved Domains (2) summary
      smart00191
      Location:283 → 339
      Int_alpha; Integrin alpha (beta-propellor repeats)
      pfam01839
      Location:351 → 378
      FG-GAP; FG-GAP repeat

    3. XM_015135674.2 → XP_014991160.2  phosphatidylinositol-glycan-specific phospholipase D isoform X2

      UniProtKB/TrEMBL
      F7H5Q6
      Conserved Domains (3) summary
      smart00191
      Location:447 → 503
      Int_alpha; Integrin alpha (beta-propellor repeats)
      pfam00882
      Location:29 → 212
      Zn_dep_PLPC; Zinc dependent phospholipase C
      pfam01839
      Location:515 → 542
      FG-GAP; FG-GAP repeat
    Nucleotide Protein
    Heading Accession and Version

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