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    ACER1 alkaline ceramidase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 699093, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ACER1provided by VGNC
    Official Full Name
    alkaline ceramidase 1provided by VGNC
    Primary source
    VGNC:VGNC:69460
    Locus tag
    EGK_09983
    See related
    Ensembl:ENSMMUG00000005698
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ACER1 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (6243365..6294492, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (6507574..6529716, complement)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase bubblegum family member 2 Neighboring gene uncharacterized LOC106994618 Neighboring gene uncharacterized LOC701983 Neighboring gene MLLT1 super elongation complex subunit Neighboring gene uncharacterized LOC114674142 Neighboring gene caseinolytic mitochondrial matrix peptidase proteolytic subunit Neighboring gene alkB homolog 7 Neighboring gene persephin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ceramide metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alkaline ceramidase 1
    XP_001087211.1
    XP_028695697.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      6243365..6294492 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028839864.1 → XP_028695697.1  alkaline ceramidase 1 isoform X1

      Conserved Domains (1) summary
      pfam05875
      Location:1 → 212
      Ceramidase

    2. XM_001087211.4 → XP_001087211.1  alkaline ceramidase 1 isoform X2

      See identical proteins and their annotated locations for XP_001087211.1

      UniProtKB/TrEMBL
      A0A8J8XX29, F6U4Z7, G7NMK4
      Related
      ENSMMUP00000007520.2, ENSMMUT00000008001.4
      Conserved Domains (1) summary
      pfam05875
      Location:3 → 255
      Ceramidase
    Nucleotide Protein
    Heading Accession and Version

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