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    CDH20 cadherin 20 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698968, updated on 17-Aug-2024

    Summary

    Official Symbol
    CDH20provided by VGNC
    Official Full Name
    cadherin 20provided by VGNC
    Primary source
    VGNC:VGNC:70970
    See related
    Ensembl:ENSMMUG00000001713
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
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    Genomic context

    See CDH20 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 18 NC_041771.1 (18584477..18808190, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 18 NC_027910.1 (50885154..51108918)

    Chromosome 18 - NC_041771.1Genomic Context describing neighboring genes Neighboring gene U6 snRNA-associated Sm-like protein LSm6 pseudogene Neighboring gene uncharacterized LOC114673804 Neighboring gene uncharacterized LOC114673841 Neighboring gene 60S ribosomal protein L30 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC114673781 Neighboring gene uncharacterized LOC114673733

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cadherin binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of catenin complex IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    cadherin-20
    Names
    cadherin-20 preproprotein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041771.1 Reference Mmul_10 Primary Assembly

      Range
      18584477..18808190 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015122130.2XP_014977616.2  cadherin-20 isoform X1

      UniProtKB/TrEMBL
      A0A8J8XN38, G7NKT4, H9FT71, I2CYK8
      Conserved Domains (3) summary
      cd11304
      Location:394490
      Cadherin_repeat; Cadherin tandem repeat domain
      smart00112
      Location:85163
      CA; Cadherin repeats
      pfam01049
      Location:643794
      Cadherin_C; Cadherin cytoplasmic region
    2. XM_028838184.1XP_028694017.1  cadherin-20 isoform X2

      UniProtKB/TrEMBL
      F7FZG1, H9FT71
      Related
      ENSMMUP00000002285.4, ENSMMUT00000002417.4
      Conserved Domains (3) summary
      cd11304
      Location:388484
      Cadherin_repeat; Cadherin tandem repeat domain
      smart00112
      Location:79157
      CA; Cadherin repeats
      pfam01049
      Location:637788
      Cadherin_C; Cadherin cytoplasmic region
    3. XM_028838185.1XP_028694018.1  cadherin-20 isoform X2

      UniProtKB/TrEMBL
      F7FZG1, H9FT71
      Conserved Domains (3) summary
      cd11304
      Location:388484
      Cadherin_repeat; Cadherin tandem repeat domain
      smart00112
      Location:79157
      CA; Cadherin repeats
      pfam01049
      Location:637788
      Cadherin_C; Cadherin cytoplasmic region