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    TSC22D1 TSC22 domain family member 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701076, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TSC22D1provided by VGNC
    Official Full Name
    TSC22 domain family member 1provided by VGNC
    Primary source
    VGNC:VGNC:79053
    See related
    Ensembl:ENSMMUG00000003753
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TSC22D1 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 17 NC_041770.1 (22985172..23129950, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 17 NC_027909.1 (23620112..23766368, complement)

    Chromosome 17 - NC_041770.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114673424 Neighboring gene uncharacterized LOC114673475 Neighboring gene microRNA mir-7169 Neighboring gene translation initiation factor IF-2-like Neighboring gene SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 pseudogene Neighboring gene small nucleolar RNA U13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TSC22 domain family protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041770.1 Reference Mmul_10 Primary Assembly

      Range
      22985172..23129950 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015121004.2 → XP_014976490.2  TSC22 domain family protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RDM4, H9ZEV3
      Related
      ENSMMUP00000058417.2, ENSMMUT00000062014.2
      Conserved Domains (3) summary
      PHA03247
      Location:571 → 921
      PHA03247; large tegument protein UL36; Provisional
      PRK10811
      Location:678 → 842
      rne; ribonuclease E; Reviewed
      pfam01166
      Location:981 → 1027
      TSC22; TSC-22/dip/bun family

    2. XM_015121007.2 → XP_014976493.1  TSC22 domain family protein 1 isoform X4

      Conserved Domains (1) summary
      cl40461
      Location:1 → 74
      ZIP_TSC22D-like; leucine zipper found in the TSC22 domain leucine zipper transcription factors, c-Myc-binding protein, and similar proteins

    3. XM_015121008.2 → XP_014976494.1  TSC22 domain family protein 1 isoform X4

      Conserved Domains (1) summary
      cl40461
      Location:1 → 74
      ZIP_TSC22D-like; leucine zipper found in the TSC22 domain leucine zipper transcription factors, c-Myc-binding protein, and similar proteins

    4. XM_015121006.2 → XP_014976492.1  TSC22 domain family protein 1 isoform X3

      UniProtKB/TrEMBL
      H9YY78
      Related
      ENSMMUP00000071088.1, ENSMMUT00000096392.1
      Conserved Domains (1) summary
      cd21938
      Location:54 → 132
      ZIP_TSC22D1; leucine zipper domain found in TSC22 domain family protein 1

    5. XM_028837297.1 → XP_028693130.1  TSC22 domain family protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QG15
      Conserved Domains (2) summary
      PHA03247
      Location:571 → 921
      PHA03247; large tegument protein UL36; Provisional
      PRK10811
      Location:678 → 842
      rne; ribonuclease E; Reviewed

    RNA

    1. XR_001440752.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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