U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    VEZF1 vascular endothelial zinc finger 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 713848, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    VEZF1provided by VGNC
    Official Full Name
    vascular endothelial zinc finger 1provided by VGNC
    Primary source
    VGNC:VGNC:99331
    See related
    Ensembl:ENSMMUG00000004723
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See VEZF1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (38815755..38833016)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (31671948..31688331)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114673122 Neighboring gene basic salivary proline-rich protein 3 Neighboring gene serine and arginine rich splicing factor 1 Neighboring gene CUE domain containing 1 Neighboring gene uncharacterized LOC114673123 Neighboring gene mitochondrial ribosomal protein S23

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    vascular endothelial zinc finger 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      38815755..38833016
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028836301.1 → XP_028692134.1  vascular endothelial zinc finger 1 isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q052, G7NHR1, H9FZJ3
      Related
      ENSMMUP00000041414.2, ENSMMUT00000077121.2
      Conserved Domains (4) summary
      PRK12799
      Location:378 → 495
      motB; flagellar motor protein MotB; Reviewed
      COG5189
      Location:198 → 255
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:176 → 196
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:174 → 196
      zf-C2H2; Zinc finger, C2H2 type

    2. XM_028836300.1 → XP_028692133.1  vascular endothelial zinc finger 1 isoform X1

      UniProtKB/TrEMBL
      G7NHR1
      Conserved Domains (4) summary
      PRK12799
      Location:384 → 501
      motB; flagellar motor protein MotB; Reviewed
      COG5189
      Location:198 → 255
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:176 → 196
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:174 → 196
      zf-C2H2; Zinc finger, C2H2 type

    3. XM_015119165.2 → XP_014974651.1  vascular endothelial zinc finger 1 isoform X3

      UniProtKB/TrEMBL
      G7NHR1
      Conserved Domains (4) summary
      PRK12799
      Location:375 → 492
      motB; flagellar motor protein MotB; Reviewed
      COG5189
      Location:189 → 246
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:167 → 187
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:165 → 187
      zf-C2H2; Zinc finger, C2H2 type

    4. XM_001103313.4 → XP_001103313.2  vascular endothelial zinc finger 1 isoform X4

      See identical proteins and their annotated locations for XP_001103313.2

      UniProtKB/TrEMBL
      A0A1D5QXN7, A0A1D5RK41, F6R5T3, G7NHR1
      Related
      ENSMMUP00000060685.2, ENSMMUT00000074916.2
      Conserved Domains (4) summary
      PRK12799
      Location:369 → 486
      motB; flagellar motor protein MotB; Reviewed
      COG5189
      Location:189 → 246
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:167 → 187
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:165 → 187
      zf-C2H2; Zinc finger, C2H2 type
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.