U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    SYTL2 synaptotagmin like 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 703187, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    SYTL2provided by VGNC
    Official Full Name
    synaptotagmin like 2provided by VGNC
    Primary source
    VGNC:VGNC:78123
    See related
    Ensembl:ENSMMUG00000012449
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SYTL2 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (78927660..79089651, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (78279675..78441586, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 126B Neighboring gene transmembrane protein 126A Neighboring gene CREB/ATF bZIP transcription factor Neighboring gene coiled-coil domain containing 89 Neighboring gene coiled-coil domain containing 83 Neighboring gene tricarboxylate transport protein, mitochondrial pseudogene Neighboring gene phosphatidylinositol binding clathrin assembly protein Neighboring gene uncharacterized LOC114672368

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables neurexin family protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in exocytic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    synaptotagmin-like protein 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      78927660..79089651 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028833882.1 → XP_028689715.1  synaptotagmin-like protein 2 isoform X4

      UniProtKB/TrEMBL
      F6WZB8, F7FK83
      Conserved Domains (3) summary
      cd04020
      Location:786 → 942
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      pfam02318
      Location:5 → 41
      FYVE_2; FYVE-type zinc finger
      cl14603
      Location:646 → 773
      C2; C2 domain

    2. XM_028833886.1 → XP_028689719.1  synaptotagmin-like protein 2 isoform X8

      UniProtKB/TrEMBL
      A0A1D5RJ64
      Conserved Domains (3) summary
      cd04020
      Location:762 → 918
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      pfam02318
      Location:5 → 41
      FYVE_2; FYVE-type zinc finger
      cl14603
      Location:622 → 749
      C2; C2 domain

    3. XM_028833885.1 → XP_028689718.1  synaptotagmin-like protein 2 isoform X7

      UniProtKB/TrEMBL
      A0A1D5RJ64, H9EWG2
      Related
      ENSMMUP00000016347.4, ENSMMUT00000017456.4
      Conserved Domains (3) summary
      cd04020
      Location:769 → 925
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      pfam02318
      Location:5 → 41
      FYVE_2; FYVE-type zinc finger
      cl14603
      Location:629 → 756
      C2; C2 domain

    4. XM_028833883.1 → XP_028689716.1  synaptotagmin-like protein 2 isoform X5

      UniProtKB/TrEMBL
      F6WZB8, H9FW75
      Related
      ENSMMUP00000016345.4, ENSMMUT00000017454.4
      Conserved Domains (3) summary
      cd04020
      Location:785 → 941
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      pfam02318
      Location:5 → 41
      FYVE_2; FYVE-type zinc finger
      cl14603
      Location:645 → 772
      C2; C2 domain

    5. XM_015115358.2 → XP_014970844.2  synaptotagmin-like protein 2 isoform X1

      Conserved Domains (2) summary
      cd04020
      Location:989 → 1145
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      cl14603
      Location:849 → 976
      C2; C2 domain

    6. XM_015115365.2 → XP_014970851.1  synaptotagmin-like protein 2 isoform X9

      UniProtKB/TrEMBL
      F6WZB8
      Conserved Domains (3) summary
      cd04020
      Location:745 → 901
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      cl14603
      Location:605 → 732
      C2; C2 domain
      cl22851
      Location:5 → 41
      PHD_SF; PHD finger superfamily

    7. XM_028833884.1 → XP_028689717.1  synaptotagmin-like protein 2 isoform X6

      UniProtKB/TrEMBL
      A0A1D5RJ64, F7FK72, I2CTK0
      Conserved Domains (3) summary
      cd04020
      Location:770 → 926
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      pfam02318
      Location:5 → 41
      FYVE_2; FYVE-type zinc finger
      cl14603
      Location:630 → 757
      C2; C2 domain

    8. XM_028833888.1 → XP_028689721.1  synaptotagmin-like protein 2 isoform X13

      UniProtKB/TrEMBL
      G7NEG9
      Conserved Domains (2) summary
      cd04020
      Location:1612 → 1768
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      cl14603
      Location:1472 → 1599
      C2; C2 domain

    9. XM_028833879.1 → XP_028689712.1  synaptotagmin-like protein 2 isoform X2

      Conserved Domains (2) summary
      cd04020
      Location:973 → 1129
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      cl14603
      Location:833 → 960
      C2; C2 domain

    10. XM_028833880.1 → XP_028689713.1  synaptotagmin-like protein 2 isoform X3

      Conserved Domains (2) summary
      cd04020
      Location:949 → 1105
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      cl14603
      Location:809 → 936
      C2; C2 domain

    11. XM_015115357.2 → XP_014970843.2  synaptotagmin-like protein 2 isoform X12

      Conserved Domains (2) summary
      cd04020
      Location:734 → 890
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      cl14603
      Location:594 → 721
      C2; C2 domain

    12. XM_015115367.2 → XP_014970853.1  synaptotagmin-like protein 2 isoform X10

      UniProtKB/TrEMBL
      A0A1D5RJ64
      Conserved Domains (3) summary
      cd04020
      Location:729 → 885
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      cl14603
      Location:589 → 716
      C2; C2 domain
      cl22851
      Location:5 → 41
      PHD_SF; PHD finger superfamily

    13. XM_015115366.2 → XP_014970852.1  synaptotagmin-like protein 2 isoform X9

      UniProtKB/TrEMBL
      F6WZB8
      Conserved Domains (3) summary
      cd04020
      Location:745 → 901
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      cl14603
      Location:605 → 732
      C2; C2 domain
      cl22851
      Location:5 → 41
      PHD_SF; PHD finger superfamily

    14. XM_028833881.1 → XP_028689714.1  synaptotagmin-like protein 2 isoform X4

      UniProtKB/TrEMBL
      F6WZB8, F7FK83
      Conserved Domains (3) summary
      cd04020
      Location:786 → 942
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      pfam02318
      Location:5 → 41
      FYVE_2; FYVE-type zinc finger
      cl14603
      Location:646 → 773
      C2; C2 domain

    15. XM_028833887.1 → XP_028689720.1  synaptotagmin-like protein 2 isoform X11

      Conserved Domains (2) summary
      cd04020
      Location:160 → 316
      C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
      cl14603
      Location:20 → 147
      C2; C2 domain

    RNA

    1. XR_003722712.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.