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    GALNT18 polypeptide N-acetylgalactosaminyltransferase 18 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701790, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GALNT18provided by VGNC
    Official Full Name
    polypeptide N-acetylgalactosaminyltransferase 18provided by VGNC
    Primary source
    VGNC:VGNC:72811
    Locus tag
    EGK_06485
    See related
    Ensembl:ENSMMUG00000004777
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    GALNTL4
    Orthologs
    human mouse all
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    Genomic context

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    See GALNT18 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (54010685..54372979)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (54808498..55174770)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114672320 Neighboring gene dickkopf WNT signaling pathway inhibitor 3 Neighboring gene ubiquitin specific peptidase 47 Neighboring gene uncharacterized LOC114672335 Neighboring gene uncharacterized LOC114672336 Neighboring gene 40S ribosomal protein S17 pseudogene Neighboring gene uncharacterized LOC114672338 Neighboring gene activating transcription factor 7-interacting protein 2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polypeptide N-acetylgalactosaminyltransferase 18
    Names
    UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4
    putative polypeptide N-acetylgalactosaminyltransferase-like protein 4
    XP_014970345.1
    XP_014970346.1
    XP_014970347.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      54010685..54372979
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015114859.2 → XP_014970345.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q183, A0A5S6RAQ2, A0A8J8YHR2, F6SLD3, G7NDX0
      Related
      ENSMMUP00000006347.4, ENSMMUT00000006746.4
      Conserved Domains (2) summary
      cd02510
      Location:157 → 458
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      cd00161
      Location:471 → 596
      RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

    2. XM_015114860.2 → XP_014970346.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q183
      Conserved Domains (2) summary
      cd02510
      Location:157 → 458
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      cd00161
      Location:475 → 564
      RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

    3. XM_015114861.2 → XP_014970347.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X3

      UniProtKB/TrEMBL
      A0A1D5Q183
      Conserved Domains (2) summary
      cd00161
      Location:409 → 534
      RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
      cl11394
      Location:157 → 396
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    Nucleotide Protein
    Heading Accession and Version

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