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    RIMKLB ribosomal modification protein rimK like family member B [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 722261, updated on 5-Mar-2024

    Summary

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    Gene symbol
    RIMKLB
    Gene description
    ribosomal modification protein rimK like family member B
    See related
    Ensembl:ENSMMUG00000022676
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RIMKLB in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (10969310..11057279, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (8997524..9085607)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene proline-rich protein 13 pseudogene Neighboring gene alpha-2-macroglobulin like 1 Neighboring gene Fanconi anemia core complex-associated protein 24-like Neighboring gene microfibril associated protein 5 Neighboring gene trifunctional enzyme subunit alpha, mitochondrial pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ligase activity, forming carbon-nitrogen bonds IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein modification process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta-citrylglutamate synthase B
    Names
    beta-citryl-glutamate synthase B
    NP_001247753.1
    XP_015006492.1
    XP_015006493.1
    XP_015006494.1
    XP_015006495.1
    XP_015006496.1
    XP_015006497.1
    XP_028684869.1
    XP_028684870.1
    XP_028684871.1
    XP_028684872.1
    XP_028684873.1
    XP_028684874.1
    XP_028684875.1
    XP_028684876.1
    XP_028684878.1
    XP_028684879.1
    XP_028684880.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260824.1 → NP_001247753.1  beta-citrylglutamate synthase B

      See identical proteins and their annotated locations for NP_001247753.1

      Status: PROVISIONAL

      Source sequence(s)
      JV047758
      UniProtKB/TrEMBL
      A0A5F7ZZA2, F7GR31, F7GU09, H9EPS3
      Related
      ENSMMUP00000063451.1, ENSMMUT00000108040.1
      Conserved Domains (1) summary
      TIGR00768
      Location:8 → 303
      rimK_fam; alpha-L-glutamate ligase, RimK family

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      10969310..11057279 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015151009.2 → XP_015006495.1  beta-citrylglutamate synthase B isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZZA2, F7GR31, F7GU09, H9EPS3
      Conserved Domains (1) summary
      TIGR00768
      Location:8 → 303
      rimK_fam; alpha-L-glutamate ligase, RimK family

    2. XM_015151006.2 → XP_015006492.1  beta-citrylglutamate synthase B isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZZA2, F7GR31, F7GU09, H9EPS3
      Conserved Domains (1) summary
      TIGR00768
      Location:8 → 303
      rimK_fam; alpha-L-glutamate ligase, RimK family

    3. XM_028829047.1 → XP_028684880.1  beta-citrylglutamate synthase B isoform X2

      Conserved Domains (1) summary
      cl17255
      Location:8 → 282
      CPSase_L_D2; Carbamoyl-phosphate synthase L chain, ATP binding domain

    4. XM_028829046.1 → XP_028684879.1  beta-citrylglutamate synthase B isoform X2

      Conserved Domains (1) summary
      cl17255
      Location:8 → 282
      CPSase_L_D2; Carbamoyl-phosphate synthase L chain, ATP binding domain

    5. XM_028829045.1 → XP_028684878.1  beta-citrylglutamate synthase B isoform X2

      Conserved Domains (1) summary
      cl17255
      Location:8 → 282
      CPSase_L_D2; Carbamoyl-phosphate synthase L chain, ATP binding domain

    6. XM_028829041.1 → XP_028684874.1  beta-citrylglutamate synthase B isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZZA2, F7GR31, F7GU09, H9EPS3
      Conserved Domains (1) summary
      TIGR00768
      Location:8 → 303
      rimK_fam; alpha-L-glutamate ligase, RimK family

    7. XM_028829042.1 → XP_028684875.1  beta-citrylglutamate synthase B isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZZA2, F7GR31, F7GU09, H9EPS3
      Related
      ENSMMUP00000068707.1, ENSMMUT00000082407.1
      Conserved Domains (1) summary
      TIGR00768
      Location:8 → 303
      rimK_fam; alpha-L-glutamate ligase, RimK family

    8. XM_028829040.1 → XP_028684873.1  beta-citrylglutamate synthase B isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZZA2, F7GR31, F7GU09, H9EPS3
      Conserved Domains (1) summary
      TIGR00768
      Location:8 → 303
      rimK_fam; alpha-L-glutamate ligase, RimK family

    9. XM_028829039.1 → XP_028684872.1  beta-citrylglutamate synthase B isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZZA2, F7GR31, F7GU09, H9EPS3
      Conserved Domains (1) summary
      TIGR00768
      Location:8 → 303
      rimK_fam; alpha-L-glutamate ligase, RimK family

    10. XM_028829036.1 → XP_028684869.1  beta-citrylglutamate synthase B isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZZA2, F7GR31, F7GU09, H9EPS3
      Conserved Domains (1) summary
      TIGR00768
      Location:8 → 303
      rimK_fam; alpha-L-glutamate ligase, RimK family

    11. XM_028829038.1 → XP_028684871.1  beta-citrylglutamate synthase B isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZZA2, F7GR31, F7GU09, H9EPS3
      Conserved Domains (1) summary
      TIGR00768
      Location:8 → 303
      rimK_fam; alpha-L-glutamate ligase, RimK family

    12. XM_028829037.1 → XP_028684870.1  beta-citrylglutamate synthase B isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZZA2, F7GR31, F7GU09, H9EPS3
      Conserved Domains (1) summary
      TIGR00768
      Location:8 → 303
      rimK_fam; alpha-L-glutamate ligase, RimK family

    13. XM_015151011.2 → XP_015006497.1  beta-citrylglutamate synthase B isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZZA2, F7GR31, F7GU09, H9EPS3
      Conserved Domains (1) summary
      TIGR00768
      Location:8 → 303
      rimK_fam; alpha-L-glutamate ligase, RimK family

    14. XM_028829043.1 → XP_028684876.1  beta-citrylglutamate synthase B isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZZA2, F7GR31, F7GU09, H9EPS3
      Conserved Domains (1) summary
      TIGR00768
      Location:8 → 303
      rimK_fam; alpha-L-glutamate ligase, RimK family

    15. XM_015151010.2 → XP_015006496.1  beta-citrylglutamate synthase B isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZZA2, F7GR31, F7GU09, H9EPS3
      Conserved Domains (1) summary
      TIGR00768
      Location:8 → 303
      rimK_fam; alpha-L-glutamate ligase, RimK family

    16. XM_015151008.2 → XP_015006494.1  beta-citrylglutamate synthase B isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZZA2, F7GR31, F7GU09, H9EPS3
      Conserved Domains (1) summary
      TIGR00768
      Location:8 → 303
      rimK_fam; alpha-L-glutamate ligase, RimK family

    17. XM_015151007.2 → XP_015006493.1  beta-citrylglutamate synthase B isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZZA2, F7GR31, F7GU09, H9EPS3
      Conserved Domains (1) summary
      TIGR00768
      Location:8 → 303
      rimK_fam; alpha-L-glutamate ligase, RimK family
    Nucleotide Protein
    Heading Accession and Version

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