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    SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704743, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SMUG1provided by VGNC
    Official Full Name
    single-strand-selective monofunctional uracil-DNA glycosylase 1provided by VGNC
    Primary source
    VGNC:VGNC:77730
    See related
    Ensembl:ENSMMUG00000011642
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SMUG1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (53782325..53794286, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (52853942..52863030, complement)

    Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107000881 Neighboring gene uncharacterized LOC114670862 Neighboring gene chromobox 5 Neighboring gene heterogeneous nuclear ribonucleoprotein A1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables single-strand selective uracil DNA N-glycosylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in base-excision repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    single-strand selective monofunctional uracil DNA glycosylase
    NP_001181686.1
    XP_001109204.1
    XP_015007300.1
    XP_015007301.1
    XP_015007302.1
    XP_028684705.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001194757.1 → NP_001181686.1  single-strand selective monofunctional uracil DNA glycosylase

      See identical proteins and their annotated locations for NP_001181686.1

      Status: PROVISIONAL

      Source sequence(s)
      QNVO02000060
      UniProtKB/TrEMBL
      F6PUL5
      Conserved Domains (1) summary
      cd10029
      Location:29 → 258
      UDG_F3_SMUG; SMUG: single-strand-selective monofunctional uracil-DNA glycosylase

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041764.1 Reference Mmul_10 Primary Assembly

      Range
      53782325..53794286 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001109204.4 → XP_001109204.1  single-strand selective monofunctional uracil DNA glycosylase isoform X1

      See identical proteins and their annotated locations for XP_001109204.1

      UniProtKB/TrEMBL
      F6PUL5
      Conserved Domains (1) summary
      cd10029
      Location:29 → 258
      UDG_F3_SMUG; SMUG: single-strand-selective monofunctional uracil-DNA glycosylase

    2. XM_028828872.1 → XP_028684705.1  single-strand selective monofunctional uracil DNA glycosylase isoform X1

      UniProtKB/TrEMBL
      F6PUL5
      Conserved Domains (1) summary
      cd10029
      Location:29 → 258
      UDG_F3_SMUG; SMUG: single-strand-selective monofunctional uracil-DNA glycosylase

    3. XM_015151815.2 → XP_015007301.1  single-strand selective monofunctional uracil DNA glycosylase isoform X1

      UniProtKB/TrEMBL
      F6PUL5
      Related
      ENSMMUP00000015275.2, ENSMMUT00000016304.4
      Conserved Domains (1) summary
      cd10029
      Location:29 → 258
      UDG_F3_SMUG; SMUG: single-strand-selective monofunctional uracil-DNA glycosylase

    4. XM_015151816.2 → XP_015007302.1  single-strand selective monofunctional uracil DNA glycosylase isoform X1

      UniProtKB/TrEMBL
      F6PUL5
      Conserved Domains (1) summary
      cd10029
      Location:29 → 258
      UDG_F3_SMUG; SMUG: single-strand-selective monofunctional uracil-DNA glycosylase

    5. XM_015151814.2 → XP_015007300.1  single-strand selective monofunctional uracil DNA glycosylase isoform X1

      UniProtKB/TrEMBL
      F6PUL5
      Conserved Domains (1) summary
      cd10029
      Location:29 → 258
      UDG_F3_SMUG; SMUG: single-strand-selective monofunctional uracil-DNA glycosylase
    Nucleotide Protein
    Heading Accession and Version

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