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    PER3 period circadian regulator 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 722059, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PER3provided by VGNC
    Official Full Name
    period circadian regulator 3provided by VGNC
    Primary source
    VGNC:VGNC:100031
    See related
    Ensembl:ENSMMUG00000018562
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PER3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (216647235..216733089, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (6914531..6975579)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene Parkinsonism associated deglycase Neighboring gene TNF receptor superfamily member 9 Neighboring gene urotensin 2 Neighboring gene calmodulin binding transcription activator 1 Neighboring gene vesicle associated membrane protein 3 Neighboring gene uncharacterized LOC106999627

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription cis-regulatory region binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in circadian regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in entrainment of circadian clock by photoperiod IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    period circadian protein homolog 3
    Names
    period 3
    period circadian clock 3
    period homolog 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      216647235..216733089 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015144956.2 → XP_015000442.2  period circadian protein homolog 3 isoform X6

      UniProtKB/TrEMBL
      F6YMC9
      Conserved Domains (3) summary
      pfam12114
      Location:1000 → 1156
      Period_C; Period protein 2/3C-terminal region
      pfam03154
      Location:753 → 1021
      Atrophin-1; Atrophin-1 family
      pfam08447
      Location:292 → 380
      PAS_3; PAS fold

    2. XM_028840270.1 → XP_028696103.1  period circadian protein homolog 3 isoform X3

      UniProtKB/TrEMBL
      F6YMC9
      Conserved Domains (3) summary
      pfam12114
      Location:1001 → 1154
      Period_C; Period protein 2/3C-terminal region
      pfam03154
      Location:753 → 1022
      Atrophin-1; Atrophin-1 family
      pfam08447
      Location:292 → 380
      PAS_3; PAS fold

    3. XM_015144811.2 → XP_015000297.2  period circadian protein homolog 3 isoform X5

      UniProtKB/TrEMBL
      A0A1D5R421, F6YMC9
      Related
      ENSMMUP00000055057.2, ENSMMUT00000057023.2
      Conserved Domains (3) summary
      pfam12114
      Location:1007 → 1163
      Period_C; Period protein 2/3C-terminal region
      pfam03154
      Location:760 → 1028
      Atrophin-1; Atrophin-1 family
      pfam08447
      Location:292 → 380
      PAS_3; PAS fold

    4. XM_028840265.1 → XP_028696098.1  period circadian protein homolog 3 isoform X2

      UniProtKB/TrEMBL
      F6YMC9
      Conserved Domains (3) summary
      pfam12114
      Location:1007 → 1160
      Period_C; Period protein 2/3C-terminal region
      pfam03154
      Location:760 → 1028
      Atrophin-1; Atrophin-1 family
      pfam08447
      Location:292 → 380
      PAS_3; PAS fold

    5. XM_002802160.3 → XP_002802206.3  period circadian protein homolog 3 isoform X4

      UniProtKB/TrEMBL
      F6YMC9
      Conserved Domains (3) summary
      pfam12114
      Location:1008 → 1164
      Period_C; Period protein 2/3C-terminal region
      pfam03154
      Location:760 → 1029
      Atrophin-1; Atrophin-1 family
      pfam08447
      Location:292 → 380
      PAS_3; PAS fold

    6. XM_028840252.1 → XP_028696085.1  period circadian protein homolog 3 isoform X1

      UniProtKB/TrEMBL
      F6YMC9
      Conserved Domains (3) summary
      pfam12114
      Location:1008 → 1161
      Period_C; Period protein 2/3C-terminal region
      pfam03154
      Location:760 → 1029
      Atrophin-1; Atrophin-1 family
      pfam08447
      Location:292 → 380
      PAS_3; PAS fold

    7. XM_028840257.1 → XP_028696090.1  period circadian protein homolog 3 isoform X1

      UniProtKB/TrEMBL
      F6YMC9
      Conserved Domains (3) summary
      pfam12114
      Location:1008 → 1161
      Period_C; Period protein 2/3C-terminal region
      pfam03154
      Location:760 → 1029
      Atrophin-1; Atrophin-1 family
      pfam08447
      Location:292 → 380
      PAS_3; PAS fold

    8. XM_028840297.1 → XP_028696130.1  period circadian protein homolog 3 isoform X7

      UniProtKB/TrEMBL
      F6YMC9
      Conserved Domains (3) summary
      pfam12114
      Location:884 → 1037
      Period_C; Period protein 2/3C-terminal region
      pfam03154
      Location:636 → 905
      Atrophin-1; Atrophin-1 family
      pfam08447
      Location:168 → 256
      PAS_3; PAS fold

    9. XM_028840304.1 → XP_028696137.1  period circadian protein homolog 3 isoform X8

      UniProtKB/TrEMBL
      F6YMC9
      Conserved Domains (2) summary
      PHA02682
      Location:759 → 880
      PHA02682; ORF080 virion core protein; Provisional
      pfam08447
      Location:292 → 380
      PAS_3; PAS fold

    RNA

    1. XR_003725237.1 RNA Sequence

    2. XR_001446615.2 RNA Sequence

    3. XR_003725238.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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