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    PUM1 pumilio RNA binding family member 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704848, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PUM1provided by VGNC
    Official Full Name
    pumilio RNA binding family member 1provided by VGNC
    Primary source
    VGNC:VGNC:76479
    Locus tag
    EGK_00481
    See related
    Ensembl:ENSMMUG00000013520
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PUM1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (193593795..193731446)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (29990739..30129663, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L21 pseudogene Neighboring gene selenoprotein W pseudogene Neighboring gene small nucleolar RNA SNORD103/SNORD85 Neighboring gene small nucleolar RNA SNORD103/SNORD85 Neighboring gene small nucleolar RNA SNORD103/SNORD85 Neighboring gene uncharacterized LOC114673215 Neighboring gene syndecan 3 Neighboring gene uncharacterized LOC106997430

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA 3'-UTR binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in miRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of mRNA stability IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pumilio homolog 1
    Names
    pumilio 1-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      193593795..193731446
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028836843.1 → XP_028692676.1  pumilio homolog 1 isoform X1

      UniProtKB/TrEMBL
      F7GNR6
      Conserved Domains (1) summary
      cd07920
      Location:884 → 1207
      Pumilio; Pumilio-family RNA binding domain

    2. XM_028836848.1 → XP_028692681.1  pumilio homolog 1 isoform X3

      UniProtKB/TrEMBL
      F7GNR6
      Conserved Domains (1) summary
      cd07920
      Location:884 → 1205
      Pumilio; Pumilio-family RNA binding domain

    3. XM_028836906.1 → XP_028692739.1  pumilio homolog 1 isoform X16

      UniProtKB/TrEMBL
      F7GNR6
      Conserved Domains (1) summary
      cd07920
      Location:805 → 1128
      Pumilio; Pumilio-family RNA binding domain

    4. XM_028836911.1 → XP_028692744.1  pumilio homolog 1 isoform X17

      UniProtKB/TrEMBL
      F7GNR6
      Conserved Domains (1) summary
      cd07920
      Location:805 → 1126
      Pumilio; Pumilio-family RNA binding domain

    5. XM_028836868.1 → XP_028692701.1  pumilio homolog 1 isoform X7

      UniProtKB/TrEMBL
      F7GNR6
      Conserved Domains (1) summary
      cd07920
      Location:857 → 1180
      Pumilio; Pumilio-family RNA binding domain

    6. XM_028836934.1 → XP_028692767.1  pumilio homolog 1 isoform X22

      UniProtKB/TrEMBL
      F7GNR6
      Conserved Domains (1) summary
      cd07920
      Location:778 → 1101
      Pumilio; Pumilio-family RNA binding domain

    7. XM_028836851.1 → XP_028692684.1  pumilio homolog 1 isoform X4

      UniProtKB/TrEMBL
      F7GNR6
      Conserved Domains (1) summary
      cd07920
      Location:880 → 1203
      Pumilio; Pumilio-family RNA binding domain

    8. XM_028836878.1 → XP_028692711.1  pumilio homolog 1 isoform X9

      UniProtKB/TrEMBL
      F7GNR6
      Conserved Domains (1) summary
      cd07920
      Location:853 → 1174
      Pumilio; Pumilio-family RNA binding domain

    9. XM_028836866.1 → XP_028692699.1  pumilio homolog 1 isoform X6

      UniProtKB/TrEMBL
      F7GNR6
      Conserved Domains (1) summary
      cd07920
      Location:879 → 1200
      Pumilio; Pumilio-family RNA binding domain

    10. XM_028836874.1 → XP_028692707.1  pumilio homolog 1 isoform X8

      UniProtKB/TrEMBL
      F7GNR6
      Conserved Domains (1) summary
      cd07920
      Location:852 → 1175
      Pumilio; Pumilio-family RNA binding domain

    11. XM_028836845.1 → XP_028692678.1  pumilio homolog 1 isoform X2

      UniProtKB/TrEMBL
      F7GNR6
      Conserved Domains (1) summary
      cd07920
      Location:883 → 1206
      Pumilio; Pumilio-family RNA binding domain

    12. XM_028836922.1 → XP_028692755.1  pumilio homolog 1 isoform X18

      UniProtKB/TrEMBL
      F7GNR4
      Conserved Domains (1) summary
      cd07920
      Location:788 → 1111
      Pumilio; Pumilio-family RNA binding domain

    13. XM_028836932.1 → XP_028692765.1  pumilio homolog 1 isoform X21

      UniProtKB/TrEMBL
      F7GNR4
      Conserved Domains (1) summary
      cd07920
      Location:784 → 1105
      Pumilio; Pumilio-family RNA binding domain

    14. XM_028836928.1 → XP_028692761.1  pumilio homolog 1 isoform X20

      UniProtKB/TrEMBL
      A0A1D5R313, F7GNR4
      Related
      ENSMMUP00000054698.2, ENSMMUT00000054156.2
      Conserved Domains (1) summary
      cd07920
      Location:783 → 1106
      Pumilio; Pumilio-family RNA binding domain

    15. XM_028836942.1 → XP_028692775.1  pumilio homolog 1 isoform X26

      UniProtKB/TrEMBL
      F7GNR4
      Conserved Domains (1) summary
      cd07920
      Location:642 → 965
      Pumilio; Pumilio-family RNA binding domain

    16. XM_028836944.1 → XP_028692777.1  pumilio homolog 1 isoform X27

      UniProtKB/TrEMBL
      F7GNR4
      Conserved Domains (1) summary
      cd07920
      Location:638 → 961
      Pumilio; Pumilio-family RNA binding domain

    17. XM_028836954.1 → XP_028692787.1  pumilio homolog 1 isoform X28

      UniProtKB/TrEMBL
      F7GNR4
      Conserved Domains (1) summary
      cd07920
      Location:637 → 960
      Pumilio; Pumilio-family RNA binding domain

    18. XM_028836964.1 → XP_028692797.1  pumilio homolog 1 isoform X29

      UniProtKB/TrEMBL
      F7GNR4
      Conserved Domains (1) summary
      cd07920
      Location:637 → 958
      Pumilio; Pumilio-family RNA binding domain

    19. XM_028836861.1 → XP_028692694.1  pumilio homolog 1 isoform X5

      UniProtKB/TrEMBL
      F7GNR6, G7MI17
      Conserved Domains (1) summary
      cd07920
      Location:879 → 1202
      Pumilio; Pumilio-family RNA binding domain

    20. XM_015133602.2 → XP_014989088.1  pumilio homolog 1 isoform X10

      UniProtKB/TrEMBL
      F7GNR6
      Conserved Domains (1) summary
      cd07920
      Location:848 → 1171
      Pumilio; Pumilio-family RNA binding domain

    21. XM_015133640.2 → XP_014989126.1  pumilio homolog 1 isoform X12

      UniProtKB/TrEMBL
      F7GNR6, H9YY47
      Related
      ENSMMUP00000078498.1, ENSMMUT00000080570.1
      Conserved Domains (1) summary
      cd07920
      Location:843 → 1166
      Pumilio; Pumilio-family RNA binding domain

    22. XM_015133646.2 → XP_014989132.1  pumilio homolog 1 isoform X13

      UniProtKB/TrEMBL
      F7GNR6, H9EP65
      Related
      ENSMMUP00000017782.4, ENSMMUT00000018986.4
      Conserved Domains (1) summary
      cd07920
      Location:843 → 1164
      Pumilio; Pumilio-family RNA binding domain

    23. XM_015133611.2 → XP_014989097.1  pumilio homolog 1 isoform X11

      UniProtKB/TrEMBL
      F7GNR6
      Conserved Domains (1) summary
      cd07920
      Location:847 → 1170
      Pumilio; Pumilio-family RNA binding domain

    24. XM_015133676.2 → XP_014989162.1  pumilio homolog 1 isoform X23

      UniProtKB/TrEMBL
      F7GNR4
      Related
      ENSMMUP00000040466.3, ENSMMUT00000047432.3
      Conserved Domains (1) summary
      cd07920
      Location:752 → 1075
      Pumilio; Pumilio-family RNA binding domain

    25. XM_028836940.1 → XP_028692773.1  pumilio homolog 1 isoform X25

      UniProtKB/TrEMBL
      F7GNR6
      Conserved Domains (1) summary
      cd07920
      Location:724 → 1047
      Pumilio; Pumilio-family RNA binding domain

    26. XM_028836937.1 → XP_028692770.1  pumilio homolog 1 isoform X24

      UniProtKB/TrEMBL
      F7GNR6
      Related
      ENSMMUP00000061717.1, ENSMMUT00000098574.1
      Conserved Domains (1) summary
      cd07920
      Location:765 → 1088
      Pumilio; Pumilio-family RNA binding domain

    27. XM_015133619.2 → XP_014989105.1  pumilio homolog 1 isoform X14

      UniProtKB/TrEMBL
      F7GNR6
      Conserved Domains (1) summary
      cd07920
      Location:848 → 1169
      Pumilio; Pumilio-family RNA binding domain

    28. XM_028836902.1 → XP_028692735.1  pumilio homolog 1 isoform X15

      UniProtKB/TrEMBL
      F7GNR6
      Related
      ENSMMUP00000078029.1, ENSMMUT00000087873.1
      Conserved Domains (1) summary
      cd07920
      Location:844 → 1165
      Pumilio; Pumilio-family RNA binding domain

    29. XM_001096958.4 → XP_001096958.1  pumilio homolog 1 isoform X19

      See identical proteins and their annotated locations for XP_001096958.1

      UniProtKB/TrEMBL
      F7GNR6
      Conserved Domains (1) summary
      cd07920
      Location:817 → 1140
      Pumilio; Pumilio-family RNA binding domain
    Nucleotide Protein
    Heading Accession and Version

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