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    zgc:173544 zgc:173544 [ Danio rerio (zebrafish) ]

    Gene ID: 793869, updated on 9-Dec-2024

    Summary

    Official Symbol
    zgc:173544provided by ZNC
    Official Full Name
    zgc:173544provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-6229
    See related
    Ensembl:ENSDARG00000070714 AllianceGenome:ZFIN:ZDB-GENE-030131-6229
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fi39f12; wu:fi39f12
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See zgc:173544 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (16019107..16021524, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (15884472..15886889, complement)

    Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene pantothenate kinase 4 (inactive) Neighboring gene dorsal inhibitory axon guidance protein a Neighboring gene angiotensin II receptor-associated protein Neighboring gene chitobiase, di-N-acetyl-

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    uncharacterized protein LOC793869

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001113630.2NP_001107102.2  uncharacterized protein LOC793869 precursor

      Status: VALIDATED

      Source sequence(s)
      CR848761
      UniProtKB/TrEMBL
      A0A2R8Q8I5, A0A8M9QLR1, A0A8N7UYP7, F1QMW9
      Related
      ENSDARP00000094882.4, ENSDART00000104107.5

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007122.7 Reference GRCz11 Primary Assembly

      Range
      16019107..16021524 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394809.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      193808..198518 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)