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    Zfp511 zinc finger protein 511 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 293586, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Zfp511provided by RGD
    Official Full Name
    zinc finger protein 511provided by RGD
    Primary source
    RGD:1308585
    See related
    EnsemblRapid:ENSRNOG00000018272 AllianceGenome:RGD:1308585
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Znf511
    Summary
    Orthologous to human ZNF511 (zinc finger protein 511). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Adrenal (RPKM 63.4), Kidney (RPKM 47.7) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Zfp511 in Genome Data Viewer
    Location:
    1q41
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (204247349..204251754)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (194817697..194822102)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (212359293..212363698)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase domain 8 Neighboring gene uncharacterized LOC134485200 Neighboring gene tubulin gamma complex component 2 Neighboring gene 60S ribosomal protein L36-like Neighboring gene 5'-nucleotidase, cytosolic IIIA, pseudogene 1 Neighboring gene msh homeobox 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    zinc finger protein 511

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001106309.1 → NP_001099779.1  zinc finger protein 511

      See identical proteins and their annotated locations for NP_001099779.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473953
      UniProtKB/TrEMBL
      A6HXE1, A6HXE2, D4AAR5

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      204247349..204251754
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039107679.2 → XP_038963607.1  zinc finger protein 511 isoform X1

      UniProtKB/TrEMBL
      A6HXE1

    2. XM_063286441.1 → XP_063142511.1  zinc finger protein 511 isoform X3

      UniProtKB/TrEMBL
      A0A8I6AIE9, A6HXE1, A6HXE3

    3. XM_063286452.1 → XP_063142522.1  zinc finger protein 511 isoform X7

      UniProtKB/TrEMBL
      A6HXE5

    4. XM_039107682.2 → XP_038963610.1  zinc finger protein 511 isoform X2

      UniProtKB/TrEMBL
      A6HXE1

    5. XM_039107686.2 → XP_038963614.1  zinc finger protein 511 isoform X4

      UniProtKB/TrEMBL
      A6HXE1
      Related
      ENSRNOP00000045081.4, ENSRNOT00000046314.6

    6. XM_039107689.2 → XP_038963617.1  zinc finger protein 511 isoform X5

      UniProtKB/TrEMBL
      A6HXE8

    7. XM_063286448.1 → XP_063142518.1  zinc finger protein 511 isoform X6

      UniProtKB/TrEMBL
      A6HXE8

    RNA

    1. XR_005503237.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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