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    Speer4a1 spermatogenesis associated glutamate (E)-rich protein 4A1 [ Mus musculus (house mouse) ]

    Gene ID: 75657, updated on 27-Nov-2024

    Summary

    Official Symbol
    Speer4a1provided by MGI
    Official Full Name
    spermatogenesis associated glutamate (E)-rich protein 4A1provided by MGI
    Primary source
    MGI:MGI:1922907
    See related
    Ensembl:ENSMUSG00000073119 AllianceGenome:MGI:1922907
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Speer4a; SPEER-4A; 1700027N01Rik
    Expression
    Biased expression in testis adult (RPKM 2.0), ovary adult (RPKM 1.6) and 4 other tissues See more
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    Genomic context

    See Speer4a1 in Genome Data Viewer
    Location:
    5 B1; 5 12.44 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (26239268..26244503, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (26034270..26039505, complement)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene ribosome biogenesis regulatory protein homolog Neighboring gene predicted gene 5862 Neighboring gene STARR-positive B cell enhancer mm9_chr5:26361061-26361362 Neighboring gene predicted gene 7347 Neighboring gene RRS1 ribosome biogenesis regulator homolog pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    spermatogenesis associated glutamate (E)-rich protein 4a
    Names
    sperm-associated glutamate (E)-rich protein 4a
    spermatogenic-associated glutamate (E)-rich protein 4a

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029376.2NP_083652.2  spermatogenesis associated glutamate (E)-rich protein 4a

      See identical proteins and their annotated locations for NP_083652.2

      Status: VALIDATED

      Source sequence(s)
      AC125090, AK006439
      Consensus CDS
      CCDS51441.1
      UniProtKB/TrEMBL
      F8VPX6, Q9D9V5
      Related
      ENSMUSP00000078415.3, ENSMUST00000079447.4
      Conserved Domains (1) summary
      pfam04822
      Location:52133
      Takusan; Takusan

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      26239268..26244503 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)