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    wu:fc50b12 wu:fc50b12 [ Danio rerio (zebrafish) ]

    Gene ID: 103911624, updated on 9-Dec-2024

    Summary

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    Official Symbol
    wu:fc50b12provided by ZNC
    Official Full Name
    wu:fc50b12provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-3700
    See related
    AllianceGenome:ZFIN:ZDB-GENE-030131-3700
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fc50b12
    Summary
    Predicted to act upstream of or within signal transduction. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See wu:fc50b12 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (17399451..17410227)
    105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (17400110..17401765)

    Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137490765 Neighboring gene sciellin Neighboring gene SLAIN motif family, member 1a Neighboring gene finTRIM family, member 53 Neighboring gene kelch repeat and BTB (POZ) domain containing 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    acts_upstream_of_or_within signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein LOC103911624
    Names
    p53-induced death domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001366641.1 → NP_001353570.1  uncharacterized protein LOC103911624

      Status: VALIDATED

      Source sequence(s)
      BX510646
      UniProtKB/TrEMBL
      A0A8M9QB77

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007120.7 Reference GRCz11 Primary Assembly

      Range
      17399451..17410227
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068223275.1 → XP_068079376.1  uncharacterized protein LOC103911624 isoform X2

      UniProtKB/TrEMBL
      A0A8M9QB77

    2. XM_068223274.1 → XP_068079375.1  uncharacterized protein LOC103911624 isoform X1

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394745.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      602773..603789
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_2

    Genomic

    1. NW_018395276.1 Reference GRCz11 ALT_DRER_TU_2

      Range
      271609..272625
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_3

    Genomic

    1. NW_018395383.1 Reference GRCz11 ALT_DRER_TU_3

      Range
      141712..142728
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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