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    Hyal5 hyaluronoglucosaminidase 5 [ Mus musculus (house mouse) ]

    Gene ID: 74468, updated on 27-Nov-2024

    Summary

    Official Symbol
    Hyal5provided by MGI
    Official Full Name
    hyaluronoglucosaminidase 5provided by MGI
    Primary source
    MGI:MGI:1921718
    See related
    Ensembl:ENSMUSG00000029678 AllianceGenome:MGI:1921718
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4933439A12Rik
    Summary
    Enables hyalurononglucosaminidase activity. Acts upstream of or within penetration of zona pellucida. Located in acrosomal vesicle and external side of plasma membrane. Orthologous to human SPAM1 (sperm adhesion molecule 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward testis adult (RPKM 24.7) See more
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    Genomic context

    See Hyal5 in Genome Data Viewer
    Location:
    6 A3.1; 6 11.28 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (24857982..24891963)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (24857937..24891959)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_15361 Neighboring gene sperm adhesion molecule 1 Neighboring gene sperm adhesion molecule 1 pseudogene Neighboring gene predicted gene, 22267 Neighboring gene STARR-seq mESC enhancer starr_15363 Neighboring gene STARR-seq mESC enhancer starr_15364 Neighboring gene STARR-seq mESC enhancer starr_15365 Neighboring gene transmembrane protein 229A

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables hyalurononglucosaminidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables hyalurononglucosaminidase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in fusion of sperm to egg plasma membrane involved in single fertilization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in hyaluronan catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within penetration of zona pellucida IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in acrosomal membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in acrosomal vesicle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in acrosomal vesicle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in external side of plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    hyaluronidase-5
    Names
    hyal-5
    hyaluronidase Hyal-5
    hyaluronidase PH-20
    NP_001404776.1
    NP_001404777.1
    NP_001404778.1
    NP_083233.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001417847.1NP_001404776.1  hyaluronidase-5 isoform a precursor

      Status: VALIDATED

      Source sequence(s)
      AC127559
      UniProtKB/Swiss-Prot
      Q812F3
      Related
      ENSMUSP00000031689.6, ENSMUST00000031689.6
    2. NM_001417848.1NP_001404777.1  hyaluronidase-5 isoform b

      Status: VALIDATED

      Source sequence(s)
      AC127559
    3. NM_001417849.1NP_001404778.1  hyaluronidase-5 isoform c

      Status: VALIDATED

      Source sequence(s)
      AC127559
    4. NM_028957.3NP_083233.1  hyaluronidase-5 isoform a precursor

      See identical proteins and their annotated locations for NP_083233.1

      Status: VALIDATED

      Source sequence(s)
      AC127559
      Consensus CDS
      CCDS19948.1
      UniProtKB/Swiss-Prot
      Q812F3
      UniProtKB/TrEMBL
      Q9CUA5
      Related
      ENSMUSP00000144011.2, ENSMUST00000200968.4
      Conserved Domains (1) summary
      pfam01630
      Location:42369
      Glyco_hydro_56; Hyaluronidase

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      24857982..24891963
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)