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    Cobl cordon-bleu WH2 repeat protein [ Urocitellus parryii (Arctic ground squirrel) ]

    Gene ID: 113193256, updated on 15-Mar-2024

    Summary

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    Gene symbol
    Cobl
    Gene description
    cordon-bleu WH2 repeat protein
    See related
    Ensembl:ENSUPAG00010021365
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Urocitellus parryii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Urocitellus
    Orthologs
    human mouse all
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    Genomic context

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    See Cobl in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    100 current ASM342692v1 (GCF_003426925.1) Unplaced Scaffold NW_020540184.1 (1909786..2185410, complement)

    NW_020540184.1Genomic Context describing neighboring genes Neighboring gene growth factor receptor bound protein 10 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC113193246 Neighboring gene dimethyladenosine transferase 1, mitochondrial-like Neighboring gene putative protein FAM45B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020540184 Unplaced Scaffold Reference ASM342692v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin monomer binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament network formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin filament polymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in axonal growth cone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in dendritic growth cone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuronal cell body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in perinuclear region of cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ruffle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in terminal web IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein cordon-bleu

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Urocitellus parryii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM342692v1

    Genomic

    1. NW_020540184.1 Reference ASM342692v1

      Range
      1909786..2185410 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026403670.1 → XP_026259455.1  protein cordon-bleu isoform X2

      UniProtKB/TrEMBL
      A0A8D2I7K0, A0A8D2IL60
      Related
      ENSUPAP00010027096.1, ENSUPAT00010030839.1
      Conserved Domains (1) summary
      pfam09469
      Location:181 → 257
      Cobl; Cordon-bleu ubiquitin-like domain

    2. XM_026403669.1 → XP_026259454.1  protein cordon-bleu isoform X1

      UniProtKB/TrEMBL
      A0A8D2IJV2
      Related
      ENSUPAP00010027147.1, ENSUPAT00010030895.1
      Conserved Domains (1) summary
      pfam09469
      Location:181 → 257
      Cobl; Cordon-bleu ubiquitin-like domain
    Nucleotide Protein
    Heading Accession and Version

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