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    loricrin-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830826, updated on 18-Sep-2024

    Summary

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    Official Full Name
    loricrin-like protein
    Primary source
    TAIR:AT5G09670
    Locus tag
    AT5G09670
    See related
    Araport:AT5G09670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17I14.140; F17I14_140
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (2995912..2998932, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene tRNA-Val Neighboring gene peroxisomal NAD-malate dehydrogenase 2 Neighboring gene reduced lateral root formation Neighboring gene magnesium transporter 7 Neighboring gene Glycosyl hydrolase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Miscellaneous features

    • Loc: c2997942-2997844 AT5G09670.uORF1
    NM_121004.2
    NM_180470.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    loricrin-like protein
    NP_196529.1
    • loricrin-related; BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3115 Blast hits to 1776 proteins in 152 species: Archae - 0; Bacteria - 24; Metazoa - 1222; Fungi - 31; Plants - 508; Viruses - 3; Other Eukaryotes - 1327 (source: NCBI BLink).
    NP_850801.1
    • loricrin-related; BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3115 Blast hits to 1776 proteins in 152 species: Archae - 0; Bacteria - 24; Metazoa - 1222; Fungi - 31; Plants - 508; Viruses - 3; Other Eukaryotes - 1327 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2995912..2998932 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180470.2 → NP_850801.1  loricrin-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850801.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UIX6, A0A5S9Y2S2, Q9LXD0

    2. NM_121004.2 → NP_196529.1  loricrin-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196529.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UIX6, A0A5S9Y2S2, Q9LXD0
    Nucleotide Protein
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